Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-879P-201ENST00000364328 108 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-843P-201ENST00000384454 104 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.570-201ENST00000384750 101 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 AC010154.1-201ENST00000425857 269 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 AC010409.1-201ENST00000487382 476 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 MIR5692C2-201ENST00000577959 77 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 MIR5685-201ENST00000579080 79 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 SCARNA4-201ENST00000629045 128 ntBASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHKBP1Q8TBC3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-653P-201ENST00000363074 106 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 RNU1-139P-201ENST00000391307 165 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AL357139.1-201ENST00000407792 426 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 MTATP6P4-201ENST00000427725 675 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AC009296.1-201ENST00000443146 155 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 MRPS10P1-201ENST00000448483 130 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 snoU13.3-201ENST00000459441 104 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 MIR6868-201ENST00000611215 58 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AC107027.3-201ENST00000565095 3473 ntBASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHKBP1Q8TBC3 AC027290.2-201ENST00000623210 18662 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC233981.2-201ENST00000611524 1614 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RNA5SP361-201ENST00000362686 118 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.217-201ENST00000364214 105 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-818P-201ENST00000364837 108 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.571-201ENST00000384753 98 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 MIR10A-201ENST00000385043 110 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 MIR569-201ENST00000385228 96 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 PTMAP2-201ENST00000397627 327 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC024067.1-201ENST00000426199 223 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AL627311.1-201ENST00000431514 115 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC009237.7-201ENST00000447357 229 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 Y_RNA.641-201ENST00000459414 105 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC117440.1-201ENST00000474107 571 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RPL21P13-201ENST00000488305 481 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RPL23AP75-201ENST00000491601 451 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC006499.6-201ENST00000511169 607 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RNA5SP272-201ENST00000516095 111 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 RNA5SP143-201ENST00000516936 115 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AC005828.6-201ENST00000606610 232 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 AL353748.2-201ENST00000622148 471 ntBASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SHKBP1Q8TBC3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 AL109809.4-201ENST00000603520 2185 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 SNORA60-201ENST00000362396 134 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-626P-201ENST00000363354 107 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNU4-84P-201ENST00000364200 139 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-336P-201ENST00000364891 107 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNU6-213P-201ENST00000384051 104 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
SHKBP1Q8TBC3 AP000870.1-201ENST00000472927 406 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms