Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 MIR764-201ENST00000390811 85 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 RNU2-36P-201ENST00000410361 191 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 RNU2-32P-201ENST00000411193 191 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 MTCO3P5-201ENST00000433620 714 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AL031313.1-201ENST00000448435 256 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 RNU6-1092P-201ENST00000516955 87 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC093249.1-201ENST00000567049 203 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC025811.1-201ENST00000604312 472 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AL022154.1-201ENST00000604698 785 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 AC097478.2-201ENST00000610572 514 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 uc_338.5-201ENST00000611839 155 ntBASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.47□□□□□ -2.17
CLHC1Q8NHS4 RNU1-58P-201ENST00000362413 163 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 Y_RNA.46-201ENST00000362695 102 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 RNY3P13-201ENST00000365542 102 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 RNU6-546P-201ENST00000383991 107 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC016831.2-201ENST00000417179 352 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AL354941.1-201ENST00000438600 464 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC007677.1-201ENST00000445757 515 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AL357134.1-201ENST00000445848 426 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AL139824.2-201ENST00000458731 1095 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 RNU2-53P-201ENST00000516257 147 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 RNU6-1003P-201ENST00000517099 105 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC105185.1-201ENST00000518705 535 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC023050.2-201ENST00000544968 387 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 CR383656.8-201ENST00000549046 145 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 MIR4307-201ENST00000582802 84 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AC112187.2-201ENST00000604345 283 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AL132822.1-201ENST00000617063 513 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AL589994.2-201ENST00000621124 579 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 AL049777.1-201ENST00000622740 518 ntBASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CLHC1Q8NHS4 FARSBP1-201ENST00000435808 1778 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 RNU6-622P-201ENST00000384272 103 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC118469.1-201ENST00000442943 488 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 RNU6-201P-201ENST00000517100 61 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AP003392.2-201ENST00000527269 208 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC092325.1-201ENST00000566449 554 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC009977.1-201ENST00000586015 570 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 CLIC4P2-201ENST00000601934 717 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC010900.2-201ENST00000604508 210 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AL391813.2-201ENST00000609113 322 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC093788.1-201ENST00000609356 927 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC108747.1-201ENST00000609508 535 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC130324.3-201ENST00000614165 542 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 uc_338.15-201ENST00000615470 191 ntBASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLHC1Q8NHS4 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 SRIP3-201ENST00000413200 219 ntBASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 AL365338.1-201ENST00000422282 858 ntBASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 AL353777.1-201ENST00000425552 326 ntBASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.44□□□□□ -2.18
CLHC1Q8NHS4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms