Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MTND5P25-201ENST00000430499 799 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 MTND4P25-201ENST00000441039 533 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 NEFMP1-201ENST00000443423 1006 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AL078601.1-201ENST00000444542 271 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC245517.4-201ENST00000448601 281 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC003071.1-201ENST00000451219 789 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC108059.3-201ENST00000456388 214 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 RNU6-953P-201ENST00000459154 107 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC109927.2-201ENST00000506416 303 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC079395.1-201ENST00000510981 262 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC109445.1-201ENST00000512356 383 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 RNA5SP445-201ENST00000515889 115 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 RNU2-53P-201ENST00000516257 147 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC090821.2-201ENST00000523552 176 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 DEFB108A-201ENST00000530110 222 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC084364.2-201ENST00000546924 395 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AP001981.2-201ENST00000603241 418 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AP000942.3-201ENST00000603702 160 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC012360.2-201ENST00000609349 391 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC093788.1-201ENST00000609356 927 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC004908.3-201ENST00000610248 625 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 RNU6-1192P-201ENST00000612197 107 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 uc_338.12-201ENST00000616344 181 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 RNU6-489P-201ENST00000618289 107 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 RNU6-462P-201ENST00000362659 105 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 SNORA7.1-201ENST00000363750 139 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 RNA5SP99-201ENST00000364020 114 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 MIR186-201ENST00000384988 86 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 SNORA48.1-201ENST00000390879 135 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 RNU2-72P-201ENST00000411175 163 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 RPS12P24-201ENST00000412619 387 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC083875.1-201ENST00000419509 405 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 AP004247.1-201ENST00000531556 1289 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC009712.1-201ENST00000564938 316 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC002400.1-201ENST00000569310 726 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC023043.2-201ENST00000589678 1026 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AL596327.1-201ENST00000603629 213 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 DLEU1_2.1-201ENST00000617920 342 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AL359757.2-201ENST00000624309 274 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC099654.8-201ENST00000637757 681 ntBASIC1□□□□□ -2.25
ZNF439Q8NDP4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1□□□□□ -2.25
ZNF439Q8NDP4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
ZNF439Q8NDP4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ZNF439Q8NDP4 AP000560.1-201ENST00000624150 1937 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 MIR378A-201ENST00000362177 66 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 RNU6-944P-201ENST00000364023 107 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 RNU5A-8P-201ENST00000364102 114 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 RNU6-701P-201ENST00000384059 107 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 RNU6-166P-201ENST00000384371 107 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC138623.1-201ENST00000418060 216 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AL591704.1-201ENST00000432574 275 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AL135790.2-201ENST00000437701 267 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC007327.1-201ENST00000447461 264 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 MED28P2-201ENST00000475771 317 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 RNVU1-2-201ENST00000516326 135 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 MTND1P36-201ENST00000522384 936 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC073413.2-201ENST00000604332 360 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 uc_338.15-201ENST00000615470 191 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 AC009269.6-201ENST00000621778 588 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 MIR3529-201ENST00000637713 78 ntBASIC0.99□□□□□ -2.25
ZNF439Q8NDP4 HAUS6P2-201ENST00000433254 2404 ntBASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 RNU6-529P-201ENST00000363383 104 ntBASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 RNU6-487P-201ENST00000365430 104 ntBASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 RNU6-546P-201ENST00000383991 107 ntBASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 RNU6-413P-201ENST00000384115 107 ntBASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 MIR1305-201ENST00000408300 86 ntBASIC0.98□□□□□ -2.25
ZNF439Q8NDP4 SRIP3-201ENST00000413200 219 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms