Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC71LQ8N9Z2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2□□□□□ -2.09
CCDC71LQ8N9Z2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC71LQ8N9Z2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2□□□□□ -2.09
CCDC71LQ8N9Z2 AC005336.3-201ENST00000623833 2679 ntBASIC2□□□□□ -2.09
CCDC71LQ8N9Z2 CDC27P3-201ENST00000635418 1910 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 MIR21-201ENST00000362134 72 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 MIR412-201ENST00000362142 91 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 SNORD116-4-201ENST00000384733 96 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 MIR27B-201ENST00000385129 97 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL360182.1-201ENST00000397433 468 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 U3.37-201ENST00000408528 213 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 Y_RNA.623-201ENST00000411128 95 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC096664.2-201ENST00000411843 406 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 PGBD4P6-201ENST00000421501 610 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 EIF4EP4-201ENST00000424916 578 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL606489.2-201ENST00000433886 234 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL360271.2-201ENST00000447710 161 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL356010.1-201ENST00000456364 102 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC112771.1-201ENST00000463581 102 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 RPL36AP48-201ENST00000485521 314 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC096576.1-201ENST00000489014 359 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC079804.2-201ENST00000490376 200 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC091435.1-201ENST00000505442 584 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 SMURF2P1-201ENST00000514992 481 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 SCARNA3-201ENST00000517097 143 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC010186.2-204ENST00000537668 439 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC079600.2-201ENST00000550076 130 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC012557.2-201ENST00000605919 418 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AP001486.3-201ENST00000615334 372 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL354950.2-201ENST00000617939 290 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC092608.2-201ENST00000624427 218 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AC124864.2-201ENST00000624736 186 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL109809.4-201ENST00000603520 2185 ntBASIC1.99□□□□□ -2.09
CCDC71LQ8N9Z2 AL359854.1-201ENST00000614203 1594 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC010329.5-201ENST00000623497 2174 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 RNU6-996P-201ENST00000365438 107 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 MIR10A-201ENST00000385043 110 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 MIR634-201ENST00000385208 97 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 RNU6-1158P-201ENST00000391167 107 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 CALM2P3-201ENST00000400429 449 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 Z92545.1-201ENST00000411782 234 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 NUP35P1-201ENST00000422734 947 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 DNAJC19P4-201ENST00000440115 345 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 MTND1P1-201ENST00000445453 368 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC003071.1-201ENST00000451219 789 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 SRRM1P2-201ENST00000464531 1192 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC026801.1-201ENST00000497178 464 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 MTND3P25-201ENST00000509243 135 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 Y_RNA.655-201ENST00000515919 96 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 RN7SKP219-201ENST00000516825 296 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AP001596.2-201ENST00000608410 312 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AL161423.1-201ENST00000613700 262 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC073534.2-201ENST00000620377 381 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 AC068792.1-201ENST00000621354 417 ntBASIC1.98□□□□□ -2.09
CCDC71LQ8N9Z2 Z75746.1-201ENST00000440243 2080 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 RNA5SP125-201ENST00000364843 120 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 RNU6-715P-201ENST00000365204 103 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 MTCO3P40-201ENST00000392516 676 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 NDUFB4P4-201ENST00000404822 243 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 CIR1P3-201ENST00000405137 479 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 RNU2-29P-201ENST00000410423 189 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 RNU4-46P-201ENST00000410818 138 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 BX276092.3-201ENST00000424182 230 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 RPL7P54-201ENST00000438336 674 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC105272.1-201ENST00000438604 198 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 EEF1B2P7-201ENST00000451177 676 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms