Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 AL669831.1-202ENST00000428504 417 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 GTF2IP13-201ENST00000438487 386 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 USP9YP8-201ENST00000441913 500 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 RPL39P29-201ENST00000447779 157 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 C1DP4-201ENST00000455429 424 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC006512.1-201ENST00000468816 291 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC079140.5-201ENST00000507882 310 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 Y_RNA.695-201ENST00000516715 107 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 RN7SKP256-201ENST00000517201 314 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC087752.4-201ENST00000605911 462 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC104237.2-201ENST00000612456 443 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 AC009090.3-201ENST00000616553 565 ntBASIC2.6□□□□□ -1.99
CCDC89Q8N998 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC89Q8N998 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC89Q8N998 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC89Q8N998 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC89Q8N998 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC89Q8N998 AL596028.1-201ENST00000326971 197 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNA5SP456-201ENST00000364002 114 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 SNORA16B-201ENST00000364674 135 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNU6-393P-201ENST00000384475 107 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNU6-1274P-201ENST00000384557 107 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 MIR29B2-201ENST00000385055 81 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 HMGN2P39-201ENST00000398005 273 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNU6-1245P-201ENST00000411130 106 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 CETN4P-201ENST00000432407 469 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC007969.2-201ENST00000441891 191 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC132479.1-201ENST00000449160 144 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 PSPHP1-201ENST00000450062 261 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RPL30P1-201ENST00000488676 339 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 MTCO3P7-201ENST00000510008 774 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNU6-430P-201ENST00000517078 107 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNU6-667P-201ENST00000517186 102 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 MTCO2P4-201ENST00000517968 247 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 AP000763.2-201ENST00000540641 163 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 MTND3P12-201ENST00000559068 328 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AL391840.1-201ENST00000571144 367 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 ELOCP29-201ENST00000588193 334 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC89Q8N998 MIR6840-201ENST00000611937 71 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AL158063.1-201ENST00000615349 536 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 AL159153.1-201ENST00000619688 317 ntBASIC2.59□□□□□ -1.99
CCDC89Q8N998 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC89Q8N998 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CCDC89Q8N998 RNU6-546P-201ENST00000383991 107 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 SNORA9-201ENST00000384215 133 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 RNU6-434P-201ENST00000384376 107 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 RPS4XP8-201ENST00000402039 771 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 RNU2-32P-201ENST00000411193 191 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.58□□□□□ -2
CCDC89Q8N998 USP9YP18-201ENST00000425912 695 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 RPS3AP12-201ENST00000443616 753 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 AL137159.1-201ENST00000452808 512 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 AC097462.2-201ENST00000504623 481 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 ARL2BPP4-201ENST00000506854 471 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 RNU6-377P-201ENST00000515965 102 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.58□□□□□ -2
CCDC89Q8N998 AP001893.2-201ENST00000526949 202 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.58□□□□□ -2
CCDC89Q8N998 SUB1P2-201ENST00000556401 297 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 AC091135.1-201ENST00000585943 307 ntBASIC2.58□□□□□ -2
CCDC89Q8N998 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.58□□□□□ -2
CCDC89Q8N998 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.58□□□□□ -2
CCDC89Q8N998 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.58□□□□□ -2
CCDC89Q8N998 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC89Q8N998 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC89Q8N998 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC89Q8N998 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.57□□□□□ -2
CCDC89Q8N998 RNU6-1159P-201ENST00000362933 107 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 RNU6-1120P-201ENST00000362988 108 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 Y_RNA.480-201ENST00000384364 102 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 RNU6-1222P-201ENST00000384615 107 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 MIR128-1-201ENST00000384921 82 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.57□□□□□ -2
CCDC89Q8N998 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.57□□□□□ -2
CCDC89Q8N998 AL031667.1-201ENST00000440222 725 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.57□□□□□ -2
CCDC89Q8N998 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.57□□□□□ -2
CCDC89Q8N998 SNORD109B-201ENST00000458961 67 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 SNORD109A-201ENST00000459128 67 ntBASIC2.57□□□□□ -2
CCDC89Q8N998 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.57□□□□□ -2
CCDC89Q8N998 AC105417.1-201ENST00000514691 285 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms