Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AP005432.2-201ENST00000608162 586 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 MIR6810-201ENST00000622701 70 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 RAD17P1-201ENST00000418130 2042 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 AC092593.1-201ENST00000515413 1815 ntBASIC4.56□□□□□ -1.68
DEPDC4Q8N2C3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 TLK1P1-201ENST00000456760 2440 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AL672167.1-203ENST00000641299 2975 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 SNORA40.19-201ENST00000390846 128 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 U3.22-201ENST00000391120 215 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 RNA5SP239-201ENST00000410218 129 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 OOSP1P1-201ENST00000423265 274 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 PTGES3P4-201ENST00000426243 356 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC006466.1-201ENST00000438721 289 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 MIR3923-201ENST00000579521 83 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 MIR4436B2-201ENST00000581415 91 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 MIR4436B1-201ENST00000583272 91 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC108706.1-201ENST00000611053 297 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC004467.1-201ENST00000615678 330 ntBASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
DEPDC4Q8N2C3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 Y_RNA.101-201ENST00000363154 102 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 MIR1182-201ENST00000408363 97 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 RNU2-54P-201ENST00000410299 190 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 RN7SKP51-201ENST00000410781 304 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AC245028.1-201ENST00000423259 256 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AL606753.1-201ENST00000427435 87 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 IFNA11P-201ENST00000446352 526 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 RPS17P2-201ENST00000461663 408 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AC011276.1-201ENST00000469688 323 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 RAB9BP1-201ENST00000519581 626 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 MIR3144-201ENST00000579460 79 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AC091152.3-201ENST00000604227 325 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AC005828.6-201ENST00000606610 232 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
DEPDC4Q8N2C3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-1010P-201ENST00000362757 107 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU1-83P-201ENST00000363426 164 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-704P-201ENST00000364162 103 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-923P-201ENST00000364753 107 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 SNORA18.3-201ENST00000384122 132 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 Y_RNA.441-201ENST00000384123 112 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU6-19P-201ENST00000384718 107 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 MIR208B-201ENST00000401172 77 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU2-37P-201ENST00000410695 177 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 AL714022.1-201ENST00000439897 151 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 snoU13.14-201ENST00000459372 104 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RPL7AP28-201ENST00000464513 571 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RPS29P22-201ENST00000472363 168 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RN7SL558P-201ENST00000497468 299 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RNU5F-2P-201ENST00000516066 82 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 TRAV8-5-201ENST00000537369 341 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 MIR4308-201ENST00000580634 81 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 AC093799.2-201ENST00000610062 578 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 uc_338.18-201ENST00000615451 175 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 OR14L1P-202ENST00000641545 3009 ntBASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
DEPDC4Q8N2C3 AL133383.2-201ENST00000622958 2336 ntBASIC4.52□□□□□ -1.69
DEPDC4Q8N2C3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DEPDC4Q8N2C3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms