Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC008669.1-201ENST00000565823 2178 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC073325.2-201ENST00000339545 159 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 MIR450B-201ENST00000401182 78 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 RNU6-1148P-201ENST00000410992 104 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AL096701.2-201ENST00000416920 238 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 MTCO3P46-201ENST00000425787 232 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC093151.1-201ENST00000427711 313 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 RPL21P40-201ENST00000428586 483 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 IFNA20P-201ENST00000436840 528 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 MTCO2P3-201ENST00000442543 421 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC233279.1-201ENST00000455300 423 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC006026.2-201ENST00000457376 180 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 snoU109.2-201ENST00000459316 135 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 RNU7-66P-201ENST00000459469 62 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 MTND4LP22-201ENST00000508209 276 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 RNU6-323P-201ENST00000521915 107 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC107953.1-201ENST00000522216 297 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC006199.1-201ENST00000548728 219 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC025281.1-201ENST00000567026 265 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC005730.3-201ENST00000583067 366 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC022306.2-201ENST00000617563 647 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AL008636.1-201ENST00000625038 1018 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BEST3Q8N1M1 AC091564.4-201ENST00000533934 2194 ntBASIC2.76□□□□□ -1.97
BEST3Q8N1M1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RNA5SP139-201ENST00000364340 117 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RNU6-831P-201ENST00000384548 107 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RNA5SP344-201ENST00000411081 104 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AC096649.2-201ENST00000416186 393 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AL139132.1-201ENST00000431587 344 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RN7SL20P-201ENST00000488827 297 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 SNORD19.2-201ENST00000516978 73 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AP004607.1-201ENST00000524456 203 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AL121821.2-201ENST00000556081 394 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 OR1M4P-201ENST00000589199 287 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 AP000787.2-201ENST00000604432 568 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 RNU6-85P-201ENST00000605989 107 ntBASIC2.75□□□□□ -1.97
BEST3Q8N1M1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
BEST3Q8N1M1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-845P-201ENST00000362578 103 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-37P-201ENST00000362692 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 SNORA5B-201ENST00000363786 132 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-11P-201ENST00000364234 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 CD24P4-201ENST00000382840 243 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-25P-201ENST00000383873 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-1-201ENST00000383898 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-48P-201ENST00000384161 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-36P-201ENST00000384172 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-4P-201ENST00000384205 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-5P-201ENST00000384238 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-3P-201ENST00000384314 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-16P-201ENST00000384385 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-15P-201ENST00000384534 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-2-201ENST00000384627 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-29P-201ENST00000384637 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-9-201ENST00000384776 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-33P-201ENST00000384793 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNA5SP354-201ENST00000391247 136 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 MTND4LP16-201ENST00000440828 295 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 MTND5P20-201ENST00000448677 143 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC083906.5-201ENST00000503722 328 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms