Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 GSTA11P-201ENST00000452866 669 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 RNA5SP310-201ENST00000459084 116 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 snoU109.2-201ENST00000459316 135 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 AC133134.1-201ENST00000466800 359 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 AK3P2-201ENST00000507976 429 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.46□□□□□ -1.7
USP48Q86UV5 RN7SKP83-201ENST00000516512 178 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.46□□□□□ -1.7
USP48Q86UV5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.46□□□□□ -1.7
USP48Q86UV5 AC011602.1-201ENST00000546484 331 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 CYCSP39-201ENST00000565821 309 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.46□□□□□ -1.7
USP48Q86UV5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.46□□□□□ -1.7
USP48Q86UV5 MIR3976-201ENST00000606807 139 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.46□□□□□ -1.7
USP48Q86UV5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.46□□□□□ -1.7
USP48Q86UV5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.46□□□□□ -1.7
USP48Q86UV5 AC007792.1-201ENST00000623023 402 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 AC002546.1-201ENST00000588041 2504 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP48Q86UV5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP48Q86UV5 HSPA8P1-201ENST00000425843 1833 ntBASIC4.46□□□□□ -1.7
USP48Q86UV5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP48Q86UV5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP48Q86UV5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP48Q86UV5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
USP48Q86UV5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP48Q86UV5 Y_RNA.153-201ENST00000363615 91 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 SNORA38.1-201ENST00000364172 131 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 RNU1-33P-201ENST00000364249 162 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 Y_RNA.364-201ENST00000365532 101 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 RNU1-73P-201ENST00000383971 164 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 RNU6-1035P-201ENST00000384477 107 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.45□□□□□ -1.7
USP48Q86UV5 AC243428.1-201ENST00000421099 264 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.45□□□□□ -1.7
USP48Q86UV5 CYCSP4-201ENST00000429682 331 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 CBX3P6-201ENST00000430257 527 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.45□□□□□ -1.7
USP48Q86UV5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.45□□□□□ -1.7
USP48Q86UV5 AC013470.1-201ENST00000453438 462 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 AC068781.1-201ENST00000488231 618 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 RNU6-377P-201ENST00000515965 102 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 AC103996.1-201ENST00000555468 102 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 LINC00933-203ENST00000559812 219 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.45□□□□□ -1.7
USP48Q86UV5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.45□□□□□ -1.7
USP48Q86UV5 MIR4273-201ENST00000582824 84 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.45□□□□□ -1.7
USP48Q86UV5 AL137843.1-201ENST00000605078 385 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 AC006157.1-201ENST00000611750 366 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 U4.1-201ENST00000620349 87 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
USP48Q86UV5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.45□□□□□ -1.7
USP48Q86UV5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP48Q86UV5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USP48Q86UV5 AC007656.2-201ENST00000624902 4547 ntBASIC4.45□□□□□ -1.7
USP48Q86UV5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP48Q86UV5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP48Q86UV5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.44□□□□□ -1.7
USP48Q86UV5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USP48Q86UV5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP48Q86UV5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.44□□□□□ -1.7
USP48Q86UV5 SET-203ENST00000372688 801 ntTSL 2 BASIC4.44□□□□□ -1.7
USP48Q86UV5 Y_RNA.428-201ENST00000384078 102 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 MIR3074-201ENST00000384885 81 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 MT-TG-201ENST00000387429 68 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 AL591034.1-201ENST00000407447 340 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 U3.37-201ENST00000408528 213 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 RNA5SP31-201ENST00000411144 127 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 AC008267.5-201ENST00000424928 265 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 RPL9P32-201ENST00000464118 620 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 AC114801.2-201ENST00000503825 781 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 SNORD116.3-201ENST00000517176 78 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 AMZ2P1-203ENST00000565833 850 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.44□□□□□ -1.7
USP48Q86UV5 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP48Q86UV5 AL137849.1-201ENST00000604767 169 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 YPEL5P2-201ENST00000605553 359 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 SNORA62.6-201ENST00000606322 83 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.44□□□□□ -1.7
USP48Q86UV5 AC138627.2-201ENST00000624202 601 ntBASIC4.44□□□□□ -1.7
USP48Q86UV5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.44□□□□□ -1.7
USP48Q86UV5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP48Q86UV5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
USP48Q86UV5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP48Q86UV5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.43□□□□□ -1.7
USP48Q86UV5 RNU6-884P-201ENST00000363889 107 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 U8.8-201ENST00000365399 135 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 SNORA1.3-201ENST00000384676 136 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
USP48Q86UV5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.43□□□□□ -1.7
USP48Q86UV5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP48Q86UV5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.43□□□□□ -1.7
USP48Q86UV5 BX276092.3-201ENST00000424182 230 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 MTCYBP10-201ENST00000424905 650 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 AC017083.1-201ENST00000428093 483 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 AC006026.2-201ENST00000457376 180 ntBASIC4.43□□□□□ -1.7
USP48Q86UV5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms