Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC027176.1-201ENST00000560204 514 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 MTND1P15-201ENST00000579262 949 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC073410.2-201ENST00000603240 332 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 MIR6817-201ENST00000615588 66 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 MIR5739-201ENST00000619803 80 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC024581.2-201ENST00000619986 252 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 AC131280.1-202ENST00000624067 4211 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRPF39Q86UA1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.67□□□□□ -1.98
PRPF39Q86UA1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 Y_RNA.159-201ENST00000363674 87 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 RNU6-434P-201ENST00000384376 107 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 SNORD70.1-201ENST00000391007 85 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AC011816.1-201ENST00000441346 546 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AL118520.1-201ENST00000450770 291 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AL356010.1-201ENST00000456364 102 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 RPL23AP49-201ENST00000492925 468 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 HMGB1P29-201ENST00000505659 499 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 PSMA3P-201ENST00000555485 635 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AP005136.1-201ENST00000579765 429 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AC004223.2-201ENST00000590309 544 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 AL138963.2-201ENST00000605137 226 ntBASIC2.66□□□□□ -1.98
PRPF39Q86UA1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRPF39Q86UA1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.65□□□□□ -1.98
PRPF39Q86UA1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PRPF39Q86UA1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 SNORD56.1-201ENST00000362913 68 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 RNU6-517P-201ENST00000384362 110 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 RNU4-55P-201ENST00000410731 137 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AL663109.1-201ENST00000411498 844 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 SUMO1P4-201ENST00000429430 302 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 PRPS1P1-201ENST00000445305 876 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 CYP2C59P-201ENST00000457790 269 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 TPT1P7-201ENST00000458300 517 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 SCARNA18-201ENST00000459004 134 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC090515.1-201ENST00000465295 476 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 MTCO3P7-201ENST00000510008 774 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 RNA5SP148-201ENST00000516527 94 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AL133241.1-201ENST00000556832 487 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC136619.2-201ENST00000563361 631 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC008752.3-201ENST00000588113 712 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AC091805.2-201ENST00000603848 235 ntBASIC2.65□□□□□ -1.99
PRPF39Q86UA1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.65□□□□□ -1.99
PRPF39Q86UA1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RNU6-527P-201ENST00000363425 104 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RNA5SP240-201ENST00000365355 128 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RNU1-57P-201ENST00000384491 166 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 OR9R1P-201ENST00000412200 877 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RPLP0P7-201ENST00000416050 667 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 USP9YP20-201ENST00000419224 558 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 EIF4EP4-201ENST00000424916 578 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AL669831.1-202ENST00000428504 417 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 GTF2IP13-201ENST00000438487 386 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RPL7P43-201ENST00000478876 753 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RPS27P27-201ENST00000498779 255 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC108078.1-201ENST00000508073 725 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RNA5SP282-201ENST00000516355 108 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 RNU6-405P-201ENST00000516637 110 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AP002770.2-201ENST00000543613 532 ntBASIC2.64□□□□□ -1.99
PRPF39Q86UA1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF39Q86UA1 MTATP6P3-201ENST00000581686 676 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms