Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RPL23AP52-201ENST00000439311 478 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG4DQ86TL0 PHBP16-201ENST00000446318 950 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 RAB9AP1-201ENST00000449393 573 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 FABP5P15-201ENST00000453566 214 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 RN7SL810P-201ENST00000493031 276 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 AC006499.6-201ENST00000511169 607 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 AC134698.5-201ENST00000519444 336 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.9□□□□□ -1.79
ATG4DQ86TL0 CYP4A43P-201ENST00000568156 121 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 MIR3138-201ENST00000585238 82 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ATG4DQ86TL0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4DQ86TL0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4DQ86TL0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 AC092593.1-201ENST00000515413 1815 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 FTLP6-201ENST00000355274 422 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RNU6-78P-201ENST00000362897 107 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RNU6-1286P-201ENST00000383871 107 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RNU6-741P-201ENST00000383889 107 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RNU6-213P-201ENST00000384051 104 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 Y_RNA.542-201ENST00000384641 111 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RPS29P17-201ENST00000430795 166 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 snoU13.3-201ENST00000459441 104 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 CYCTP-201ENST00000504253 315 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 SNORA31.19-201ENST00000517079 126 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RN7SKP234-201ENST00000517173 224 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 AL645944.1-201ENST00000603857 493 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 MIR432-201ENST00000606207 94 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 MIR3658-201ENST00000636291 56 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 AC241585.2-209ENST00000638217 143 ntBASIC3.89□□□□□ -1.79
ATG4DQ86TL0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
ATG4DQ86TL0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC022893.2-201ENST00000564832 3296 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU1-94P-201ENST00000362627 173 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU4-17P-201ENST00000365598 141 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU6-1056P-201ENST00000383996 107 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU6-1145P-201ENST00000384246 107 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU6-166P-201ENST00000384371 107 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU6-429P-201ENST00000384582 108 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNY4P18-201ENST00000391107 89 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 SNORA40C-201ENST00000391285 128 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 MIR513C-201ENST00000401352 84 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AL157831.1-201ENST00000426134 473 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 PTGES3P4-201ENST00000426243 356 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RPS26P47-201ENST00000427219 348 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC079780.1-201ENST00000428259 207 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC004975.1-201ENST00000428733 208 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC091874.1-201ENST00000511402 339 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 RNU7-121P-201ENST00000516604 62 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 TRAV8-5-201ENST00000537369 341 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AL357075.2-201ENST00000614906 189 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AL023881.1-201ENST00000621088 301 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC092628.2-201ENST00000622492 339 ntBASIC3.88□□□□□ -1.79
ATG4DQ86TL0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4DQ86TL0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 PHKBP1-201ENST00000450951 1951 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 Z73965.1-201ENST00000623412 2297 ntBASIC3.87□□□□□ -1.79
ATG4DQ86TL0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ATG4DQ86TL0 RNU6-1272P-201ENST00000362776 107 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms