Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 Vault.3-201ENST00000516676 95 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 RNU6-759P-201ENST00000516740 103 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AP005639.2-201ENST00000527592 928 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 MTND1P24-201ENST00000552175 861 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AC008015.1-201ENST00000555505 465 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AL136363.2-201ENST00000604173 851 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AL133173.2-201ENST00000614270 90 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AC138649.3-201ENST00000622154 254 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AC006386.2-201ENST00000624491 75 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 AC012005.1-201ENST00000624575 75 ntBASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
MRPL55Q7Z7F7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 snoU2_19.1-201ENST00000362361 80 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 RNY1P12-201ENST00000364251 105 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 Y_RNA.367-201ENST00000365544 101 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 MIR29C-201ENST00000385231 88 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 SNORA11-201ENST00000408789 128 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 OR6C66P-201ENST00000414917 930 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 RPS15AP10-201ENST00000432472 382 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC009961.2-201ENST00000435771 251 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC073614.1-201ENST00000438690 650 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 FDX1P2-201ENST00000450769 375 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 HMGB3P17-201ENST00000504195 649 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 RNU6-965P-201ENST00000516721 96 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 RNU6-232P-201ENST00000517144 64 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AP003072.2-201ENST00000527756 676 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 OR5AL2P-201ENST00000532185 920 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AP002453.2-201ENST00000533503 320 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 ANP32BP3-201ENST00000559213 706 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC022254.1-201ENST00000567857 235 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 MIR4319-201ENST00000577285 85 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 MIR5692A1-201ENST00000580523 69 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC007621.1-201ENST00000604544 437 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC005000.2-201ENST00000605468 310 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC067747.1-201ENST00000608026 250 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC005296.1-201ENST00000616145 209 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC108479.2-201ENST00000617314 601 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 AC007792.1-201ENST00000623023 402 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 MIR1291-201ENST00000627649 87 ntBASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.52□□□□□ -2.17
MRPL55Q7Z7F7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 RNU1-51P-201ENST00000365345 176 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 RNU6-74P-201ENST00000384235 107 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 SNORD14D-201ENST00000384390 87 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MIR597-201ENST00000384968 97 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MIR29B2-201ENST00000385055 81 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MIR483-201ENST00000385070 76 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 RNA5SP465-201ENST00000391195 109 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 RNU6-195P-201ENST00000411352 109 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 SRIP3-201ENST00000413200 219 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MTND4P20-201ENST00000424125 869 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MTND2P4-201ENST00000445034 1004 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 RPL39P29-201ENST00000447779 157 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 BZW1P2-201ENST00000473537 826 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AC104806.1-201ENST00000508720 308 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 MTND1P22-201ENST00000510572 951 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 RN7SKP287-201ENST00000516546 266 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AC087883.1-201ENST00000551882 391 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AC091135.1-201ENST00000585943 307 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 BNIP3P8-201ENST00000597863 560 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AL670379.2-201ENST00000604983 252 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AL360219.1-201ENST00000610230 366 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 uc_338.20-201ENST00000621563 178 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 AC011155.2-201ENST00000623202 216 ntBASIC1.51□□□□□ -2.17
MRPL55Q7Z7F7 Z69720.2-201ENST00000624755 279 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms