Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AP000889.2-201ENST00000532684 490 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AL022154.1-201ENST00000604698 785 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AL359821.1-201ENST00000605519 182 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AC022893.3-201ENST00000607665 437 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 MTND5P42-201ENST00000637720 498 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 RNU6-461P-201ENST00000364195 107 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 SNORA68.1-201ENST00000364537 132 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 RNU2-16P-201ENST00000410712 136 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 NDUFS5P4-201ENST00000412983 318 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 SKA2P1-201ENST00000425592 390 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC010975.2-201ENST00000427781 588 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 RPL36AP53-201ENST00000432891 316 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 MTCO3P5-201ENST00000433620 714 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 GPR143P-201ENST00000434155 205 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC132479.1-201ENST00000449160 144 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC073901.1-201ENST00000462471 408 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC117522.1-201ENST00000509821 380 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AL158032.1-201ENST00000605401 106 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 NDUFA8P1-201ENST00000605525 367 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 AC093648.1-201ENST00000623546 606 ntBASIC2.7□□□□□ -1.98
NPHP3Q7Z494 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPHP3Q7Z494 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RNU6-661P-201ENST00000362409 107 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.355-201ENST00000365462 98 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.367-201ENST00000365544 101 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RNU6-74P-201ENST00000384235 107 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 U8.10-201ENST00000384260 133 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.582-201ENST00000391023 95 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RNU6-817P-201ENST00000391083 104 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AL513475.1-201ENST00000406602 315 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 MTCO3P41-201ENST00000414801 328 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 ISCA1P1-201ENST00000426679 387 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AL591212.2-201ENST00000433923 257 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AL451074.3-201ENST00000437709 472 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 FABP5P15-201ENST00000453566 214 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RNU6-953P-201ENST00000459154 107 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RPS3AP17-201ENST00000472594 777 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 RPL39P36-201ENST00000490784 156 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC139453.3-201ENST00000493276 369 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 MTND2P33-201ENST00000506452 1031 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 PRELID2P1-201ENST00000552837 301 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 SUB1P2-201ENST00000556401 297 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 Z99571.1-201ENST00000636677 394 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC005336.3-201ENST00000623833 2679 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 AC110491.1-201ENST00000562191 2010 ntBASIC2.69□□□□□ -1.98
NPHP3Q7Z494 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.41-201ENST00000362646 102 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-778P-201ENST00000363269 103 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 SNORA4.3-201ENST00000365564 137 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 Y_RNA.517-201ENST00000384551 106 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-750P-201ENST00000390946 107 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 HMGB1P9-201ENST00000429856 646 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC116562.3-201ENST00000506136 177 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RBBP4P6-201ENST00000508098 202 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC098591.2-201ENST00000510152 315 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNA5SP445-201ENST00000515889 115 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-123P-201ENST00000516163 102 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-677P-201ENST00000516914 101 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RNU6-410P-201ENST00000517006 107 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC068587.5-201ENST00000528506 175 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC068790.2-201ENST00000602601 557 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 BNIP3P9-201ENST00000603714 553 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 RPL23AP88-201ENST00000605759 454 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AC138649.3-201ENST00000622154 254 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 U2.21-201ENST00000637295 81 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
NPHP3Q7Z494 AL137003.2-201ENST00000606924 2538 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 MTND5P26-201ENST00000426018 1752 ntBASIC2.68□□□□□ -1.98
NPHP3Q7Z494 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms