Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SNORA16.2-201ENST00000390991 127 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AL606923.1-201ENST00000406616 190 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 BTF3P7-201ENST00000407097 488 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC016831.2-201ENST00000417179 352 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 RPS3AP44-201ENST00000425466 790 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 TOMM20P4-201ENST00000427861 435 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 MTAPP1-201ENST00000489154 819 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC079140.5-201ENST00000507882 310 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 MTND4P7-201ENST00000523876 130 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AK6P1-201ENST00000540219 478 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 BNIP3P6-201ENST00000549284 499 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 MIR4424-201ENST00000585257 86 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AL162413.1-201ENST00000603198 110 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC069234.5-201ENST00000611056 416 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AC122108.2-201ENST00000611946 526 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 uc_338.34-201ENST00000617467 174 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 AL031601.2-202ENST00000622650 282 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 SCARNA4-202ENST00000625402 129 ntBASIC2.59□□□□□ -1.99
NUP54Q7Z3B4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -2
NUP54Q7Z3B4 AC092593.1-201ENST00000515413 1815 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NUP54Q7Z3B4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 RNU6-483P-201ENST00000384088 108 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 Y_RNA.480-201ENST00000384364 102 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 RNU6-192P-201ENST00000391253 100 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 AL590004.2-201ENST00000404787 371 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 RPS4XP7-201ENST00000406274 780 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 RAP1BP3-201ENST00000407180 549 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 RNU6-648P-201ENST00000410190 107 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 CYCSP33-201ENST00000414485 327 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 CYCSP48-201ENST00000417124 323 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 RPL30P4-201ENST00000429309 333 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 Z98742.2-201ENST00000431564 187 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 PRPS1P1-201ENST00000445305 876 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 RNU6-1281P-201ENST00000516223 105 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 ACA59.2-201ENST00000517061 156 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC080078.2-201ENST00000603766 501 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC244517.12-201ENST00000623581 663 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 MIR1321-201ENST00000637766 79 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.58□□□□□ -2
NUP54Q7Z3B4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.58□□□□□ -2
NUP54Q7Z3B4 AC080100.1-201ENST00000624239 5356 ntBASIC2.58□□□□□ -2
NUP54Q7Z3B4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 Y_RNA.9-201ENST00000362354 101 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 SNORA18.3-201ENST00000384122 132 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 SNORD37.1-201ENST00000390968 65 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 MTCO1P21-201ENST00000416634 589 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 PGBD4P6-201ENST00000421501 610 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC003685.2-201ENST00000422795 395 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 SEPT14P3-201ENST00000439401 183 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AL732372.2-207ENST00000445840 183 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUP54Q7Z3B4 SEPT14P2-201ENST00000453405 183 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 SEPT14P4-201ENST00000513445 186 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 RNA5SP401-201ENST00000515920 127 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 RNU4-29P-201ENST00000515943 174 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 Y_RNA.704-201ENST00000516851 102 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 FO082796.1-201ENST00000523795 183 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AP004607.1-201ENST00000524456 203 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AL133241.1-201ENST00000556832 487 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AL138976.2-201ENST00000563989 694 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 MIR5583-1-201ENST00000580941 59 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.57□□□□□ -2
NUP54Q7Z3B4 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC084782.3-201ENST00000612282 578 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC245884.12-201ENST00000615364 59 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 AC010378.1-201ENST00000619270 362 ntBASIC2.57□□□□□ -2
NUP54Q7Z3B4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms