Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPS3AP17-201ENST00000472594 777 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 HMGB1P38-201ENST00000490557 577 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC010627.1-201ENST00000503819 1294 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC138623.1-201ENST00000418060 216 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC027119.1-201ENST00000440877 241 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC084024.2-201ENST00000503480 791 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC136618.2-201ENST00000575091 400 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC090578.1-201ENST00000604955 591 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 NRON-201ENST00000517270 370 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 SNORA40.19-201ENST00000390846 128 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 MIR1285-2-201ENST00000408311 88 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AC015908.1-201ENST00000478739 476 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AP001328.1-201ENST00000528550 176 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 RNU6-220P-201ENST00000390919 107 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS13CQ709C8 AC010900.2-201ENST00000604508 210 ntBASIC-0.26□□□□□ -2.45
VPS13CQ709C8 RNA5SP327-201ENST00000362494 101 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 MIR106A-201ENST00000384870 81 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 U3.20-201ENST00000390909 217 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 RPL23AP33-201ENST00000442301 452 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AC110792.4-201ENST00000609843 298 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 TPMTP4-201ENST00000450749 678 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AC008088.1-201ENST00000580993 280 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AC008147.4-201ENST00000617570 1204 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AL135790.2-201ENST00000437701 267 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 MTCO1P44-201ENST00000441935 243 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 PDCD5P2-201ENST00000507570 312 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 AL121992.2-201ENST00000606262 256 ntBASIC-0.27□□□□□ -2.45
VPS13CQ709C8 OR5T3-201ENST00000303059 1023 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 MIR518D-201ENST00000385014 87 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 RNU2-36P-201ENST00000410361 191 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AL512844.2-201ENST00000433990 593 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 SNORD126-201ENST00000459475 77 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AC105185.1-201ENST00000518705 535 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AC008759.3-201ENST00000613300 508 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 RNY4P27-201ENST00000363341 96 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 RN7SKP266-201ENST00000410232 287 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AC090888.2-201ENST00000559765 1144 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS13CQ709C8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AP003066.2-201ENST00000529375 555 ntBASIC-0.28□□□□□ -2.45
VPS13CQ709C8 AL391994.1-201ENST00000254724 282 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 RNU6-10P-201ENST00000384036 107 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 RNU6-15P-201ENST00000384534 107 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 MIR200A-201ENST00000384875 90 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 U3.29-201ENST00000391296 212 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AL365496.1-201ENST00000426885 215 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 HSPA8P13-201ENST00000523715 472 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC104651.1-201ENST00000427559 735 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 RNU7-23P-201ENST00000459465 62 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC098869.1-201ENST00000481627 292 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC034236.3-201ENST00000605999 461 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC005832.2-201ENST00000538921 1430 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 SPINT5P-201ENST00000448174 155 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AC048346.1-201ENST00000510247 144 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 MRPS36P2-201ENST00000512569 299 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 CYP3A52P-201ENST00000563326 91 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AL357312.1-201ENST00000603879 298 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 AL590240.4-201ENST00000616908 390 ntBASIC-0.29□□□□□ -2.46
VPS13CQ709C8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 RPL30P7-201ENST00000479312 323 ntBASIC-0.3□□□□□ -2.46
VPS13CQ709C8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13CQ709C8 AC012435.1-202ENST00000568772 240 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms