Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 RNU4-54P-201ENST00000516428 129 ntBASIC0.23□□□□□ -2.37
UBR3Q6ZT12 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.23□□□□□ -2.37
UBR3Q6ZT12 AC016542.1-201ENST00000608259 493 ntBASIC0.23□□□□□ -2.37
UBR3Q6ZT12 AL138726.1-201ENST00000614873 333 ntBASIC0.23□□□□□ -2.37
UBR3Q6ZT12 RNU2-48P-201ENST00000410694 191 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC108729.1-201ENST00000487812 947 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 RPL22P13-201ENST00000493291 347 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC022483.1-201ENST00000514020 567 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 ROCK1P1-201ENST00000573767 549 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AL158032.1-201ENST00000605401 106 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 FAM157A-202ENST00000615155 405 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC087588.2-201ENST00000617667 426 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC007490.1-201ENST00000624321 703 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 MIR302D-201ENST00000362275 68 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 Y_RNA.167-201ENST00000363735 109 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 RNU6-441P-201ENST00000384545 106 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 HMGB1P17-201ENST00000403495 628 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 RNU2-43P-201ENST00000410306 190 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC004865.1-201ENST00000442276 1003 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 RPL21P47-201ENST00000483696 477 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC121161.1-201ENST00000510606 652 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 BX284668.6-201ENST00000606899 438 ntBASIC0.22□□□□□ -2.37
UBR3Q6ZT12 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBR3Q6ZT12 RNU5A-1-201ENST00000362698 116 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 RNU6-439P-201ENST00000384188 106 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 RNU6-360P-201ENST00000390944 104 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.21□□□□□ -2.38
UBR3Q6ZT12 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.21□□□□□ -2.38
UBR3Q6ZT12 AC005741.1-201ENST00000511094 432 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 SCARNA15.2-201ENST00000516409 127 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 AC002400.1-201ENST00000569310 726 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.21□□□□□ -2.38
UBR3Q6ZT12 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 MIR6134-201ENST00000617606 109 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 MIR8063-201ENST00000621930 81 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 U2.21-201ENST00000637295 81 ntBASIC0.21□□□□□ -2.38
UBR3Q6ZT12 RNU5E-1-201ENST00000362477 120 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 Y_RNA.303-201ENST00000364998 94 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 SNORD14D-201ENST00000384390 87 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 MIR514A1-201ENST00000385133 98 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 RAB11AP1-201ENST00000442978 646 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 uc_338.22-201ENST00000622722 187 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AL138713.1-201ENST00000624026 2130 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 RNA5SP368-201ENST00000364298 116 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC127391.1-201ENST00000411737 98 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 MTCYBP32-201ENST00000427945 1084 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC245102.2-201ENST00000448956 180 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC112771.1-201ENST00000463581 102 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC010631.1-201ENST00000474150 156 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 RNU6-488P-201ENST00000515918 99 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 RNU6-197P-201ENST00000516680 100 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC090142.3-201ENST00000519012 385 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AL022067.1-201ENST00000602426 454 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 AC009318.4-201ENST00000620496 486 ntBASIC0.2□□□□□ -2.38
UBR3Q6ZT12 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.2□□□□□ -2.38
UBR3Q6ZT12 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
UBR3Q6ZT12 SNORA4.3-201ENST00000365564 137 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 MIR597-201ENST00000384968 97 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 RPL26P27-201ENST00000414397 437 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.19□□□□□ -2.38
UBR3Q6ZT12 RPP40P1-201ENST00000426762 456 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AC087897.1-201ENST00000550134 156 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AL512310.8-201ENST00000550183 120 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 HMGB1P51-201ENST00000605166 638 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AP005229.2-201ENST00000609980 697 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AC040896.1-201ENST00000613819 479 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 AL627230.5-201ENST00000619807 58 ntBASIC0.19□□□□□ -2.38
UBR3Q6ZT12 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.19□□□□□ -2.38
UBR3Q6ZT12 Y_RNA.255-201ENST00000364581 97 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 RNU6-1237P-201ENST00000384777 107 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 FO393419.3-201ENST00000428741 282 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AL162730.1-201ENST00000605734 292 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AL365434.2-201ENST00000607979 234 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 AC009950.2-201ENST00000636548 183 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 MTND1P37-201ENST00000636562 264 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 SNRPEP3-201ENST00000338402 276 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 RNU6-110P-201ENST00000384508 104 ntBASIC0.18□□□□□ -2.38
UBR3Q6ZT12 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.18□□□□□ -2.38
UBR3Q6ZT12 RPS26P5-201ENST00000418544 335 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms