Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNA5SP502-201ENST00000362694 119 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 RNU5E-7P-201ENST00000365290 117 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AL078601.1-201ENST00000444542 271 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 TRBVB-201ENST00000477100 408 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 RPL30P10-201ENST00000488148 337 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-1023P-201ENST00000516137 106 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 SNORA31.8-201ENST00000516327 108 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 RNU1-103P-201ENST00000516502 125 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-572P-201ENST00000516724 80 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 RNA5SP165-201ENST00000517142 115 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AL590705.4-201ENST00000532209 134 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AC009318.2-201ENST00000610917 651 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 SNORD9-201ENST00000362566 104 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-209P-201ENST00000384118 107 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 MIR128-1-201ENST00000384921 82 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 RNU2-68P-201ENST00000410878 191 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 CEACAMP4-201ENST00000457676 421 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-377P-201ENST00000515965 102 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 Vault.1-201ENST00000516474 102 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AC109329.1-201ENST00000518744 317 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 AC090877.1-201ENST00000561418 344 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 SNORA62.6-201ENST00000606322 83 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 Z75746.1-201ENST00000440243 2080 ntBASIC4.63□□□□□ -1.67
PRPF40BQ6NWY9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-428P-201ENST00000362942 107 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 RNU1-33P-201ENST00000364249 162 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 SNORA40C-201ENST00000391285 128 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 RPEP5-201ENST00000441137 268 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 SUMO1P2-201ENST00000452524 304 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 RN7SKP210-201ENST00000459176 261 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AC139453.3-201ENST00000493276 369 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AC026784.1-201ENST00000507986 352 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AC007375.1-201ENST00000554513 578 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 AC090132.2-201ENST00000615881 347 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 SDR42E1P4-201ENST00000620894 481 ntBASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40BQ6NWY9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-212P-201ENST00000362642 104 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 U3.6-201ENST00000363622 211 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.183-201ENST00000363882 113 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-166P-201ENST00000384371 107 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 MTCYBP2-201ENST00000407745 171 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 RNA5SP120-201ENST00000410900 112 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 MTND4LP30-201ENST00000454092 297 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 LINC01399-202ENST00000458450 244 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 AC092798.1-201ENST00000458542 409 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 RNU7-87P-201ENST00000459343 62 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 RAC1P2-201ENST00000511164 579 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 AC010186.2-204ENST00000537668 439 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 AC006557.5-201ENST00000603126 811 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 AL355877.2-201ENST00000603670 358 ntBASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40BQ6NWY9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-227P-201ENST00000362865 103 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms