Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC092798.1-201ENST00000458542 409 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC021146.2-201ENST00000504736 556 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC110794.1-201ENST00000505816 425 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 RNA5SP341-201ENST00000516261 117 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 MIR892C-201ENST00000516410 77 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1213P-201ENST00000517075 94 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 SNRPGP18-201ENST00000553000 214 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC007151.1-201ENST00000572774 483 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 MIR3941-201ENST00000582572 103 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 MIR3609-201ENST00000582661 80 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC006557.5-201ENST00000603126 811 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 NUTF2P8-201ENST00000604593 363 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 AC123912.5-201ENST00000605470 343 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 MIR6076-201ENST00000617521 113 ntBASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A4Q53GD3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 MIR412-201ENST00000362142 91 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.144-201ENST00000363521 113 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 SNORA1.3-201ENST00000384676 136 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 MIR10A-201ENST00000385043 110 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 RNA5SP38-201ENST00000410750 119 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC098614.2-201ENST00000426040 255 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC084357.1-201ENST00000473404 255 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 RPL21P13-201ENST00000488305 481 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 HMGB1P30-201ENST00000492455 606 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC025423.5-201ENST00000550230 219 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC023043.2-201ENST00000589678 1026 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 U2.21-201ENST00000637295 81 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 AC118273.1-201ENST00000525324 3006 ntBASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A4Q53GD3 MTND5P16-201ENST00000460269 1703 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 MTND4P1-201ENST00000457501 1466 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU1-75P-201ENST00000347264 129 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU6-778P-201ENST00000363269 103 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU6-639P-201ENST00000384074 107 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU6-574P-201ENST00000384265 107 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 U3.39-201ENST00000408569 239 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU4-47P-201ENST00000410876 114 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU6-55P-201ENST00000411092 107 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RNU6-954P-201ENST00000411355 107 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AL139396.1-201ENST00000421137 167 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AL137792.2-201ENST00000443484 235 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AL078601.1-201ENST00000444542 271 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 Y_RNA.653-201ENST00000459091 95 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 snoU13.28-201ENST00000459235 104 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AP000867.2-201ENST00000532468 320 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 IMMP1LP2-201ENST00000552954 492 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 MIR5690-201ENST00000583739 73 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 RMST_4.1-201ENST00000616886 107 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC073308.1-201ENST00000623696 305 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 AC002546.1-201ENST00000588041 2504 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 FAM35BP-202ENST00000497389 3337 ntBASIC3.5□□□□□ -1.85
SLC44A4Q53GD3 MFSD8-233ENST00000641482 4860 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 AL356274.2-201ENST00000624379 3752 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 MTND5P19-201ENST00000424872 1794 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 MAPK10-362ENST00000641864 4484 ntBASIC3.49□□□□□ -1.85
SLC44A4Q53GD3 SNORA80A-201ENST00000363922 136 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms