Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 TRBVA-201ENST00000498804 316 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 RNA5SP217-201ENST00000515959 91 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 SNORA31.19-201ENST00000517079 126 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC103810.1-201ENST00000579873 453 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 MIR2682-201ENST00000580305 110 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 MIR5692A1-201ENST00000580523 69 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 MIR3672-201ENST00000584290 82 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 MIR548AC-201ENST00000585049 88 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC073539.2-201ENST00000597113 165 ntBASIC3.63□□□□□ -1.83
LONRF3Q496Y0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.63□□□□□ -1.83
LONRF3Q496Y0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 SNORA48.5-201ENST00000391143 135 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 RNA5SP492-201ENST00000411330 114 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC006028.1-201ENST00000438379 402 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AL360271.2-201ENST00000447710 161 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC087884.1-201ENST00000469738 328 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC117503.1-201ENST00000472241 394 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 MTCO1P29-201ENST00000496868 288 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 MIR1273C-201ENST00000578669 77 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 MIR5692C1-201ENST00000585309 91 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AL050343.2-201ENST00000607338 280 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 FAM157A-202ENST00000615155 405 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LONRF3Q496Y0 AL353743.1-202ENST00000431724 1695 ntBASIC3.62□□□□□ -1.83
LONRF3Q496Y0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 U3.6-201ENST00000363622 211 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 RNU6-395P-201ENST00000365662 106 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 MIR450B-201ENST00000401182 78 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 RNU2-25P-201ENST00000411041 191 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 VN1R36P-201ENST00000414936 291 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AC098831.1-201ENST00000440661 216 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 MTND3P25-201ENST00000509243 135 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AL121821.2-201ENST00000556081 394 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AC044792.1-201ENST00000593294 196 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AL451007.1-201ENST00000595491 289 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AL670379.10-201ENST00000604330 253 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AC113139.1-201ENST00000605049 239 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AL670379.9-201ENST00000605428 253 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 AC090574.1-201ENST00000623186 233 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 MTND5P27-201ENST00000428871 1720 ntBASIC3.61□□□□□ -1.83
LONRF3Q496Y0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LONRF3Q496Y0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.384-201ENST00000383909 102 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 Y_RNA.460-201ENST00000384255 102 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AL513043.1-201ENST00000439124 535 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 BRK1P2-201ENST00000442875 223 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 HMGN1P13-201ENST00000505795 138 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 SCARNA13-201ENST00000516672 275 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 RNU6-566P-201ENST00000516790 107 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 RNU6-703P-201ENST00000516946 107 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AC009902.1-201ENST00000519351 183 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 CYCSP27-201ENST00000527643 293 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 HSPE1P20-201ENST00000538133 289 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AC021739.1-201ENST00000559631 174 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.6□□□□□ -1.83
LONRF3Q496Y0 POLR3GP2-201ENST00000588366 668 ntBASIC3.6□□□□□ -1.83
LONRF3Q496Y0 AL591516.1-201ENST00000611326 274 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 244.2 ms