Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 TGIF1P1-201ENST00000558095 802 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AL355375.2-201ENST00000574825 175 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 POLR3GP2-201ENST00000588366 668 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AL161423.1-201ENST00000613700 262 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC024581.2-201ENST00000619986 252 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 U4.6-201ENST00000621618 127 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC110079.1-202ENST00000635213 138 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.03□□□□□ -1.77
CCDC144BQ3MJ40 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-428P-201ENST00000362942 107 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-336P-201ENST00000364891 107 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC236972.2-201ENST00000434979 310 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 DAP3P1-201ENST00000441522 278 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 OSTCP8-201ENST00000445117 448 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 GZMAP1-201ENST00000503054 631 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 RNU5B-3P-201ENST00000516601 115 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC016727.1-205ENST00000605437 569 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC099654.7-201ENST00000635788 2127 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 MTND4P29-201ENST00000503122 1372 ntBASIC4.02□□□□□ -1.77
CCDC144BQ3MJ40 AC068647.1-201ENST00000489539 2265 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-1297P-201ENST00000384415 104 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-790P-201ENST00000384479 105 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-601P-201ENST00000384540 107 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 EI24P2-201ENST00000397776 1076 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-55P-201ENST00000411092 107 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-325P-201ENST00000411132 105 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-954P-201ENST00000411355 107 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RPS4XP2-201ENST00000458402 793 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU7-187P-201ENST00000458985 68 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-1016P-201ENST00000516689 94 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 MIR4795-201ENST00000584182 89 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AC019159.1-201ENST00000605094 187 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 YPEL5P2-201ENST00000605553 359 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AL133215.3-201ENST00000609801 448 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AC022149.2-201ENST00000621061 203 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 AL732372.2-225ENST00000642124 456 ntBASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC144BQ3MJ40 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 RNA5SP390-201ENST00000410191 113 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC245054.2-201ENST00000415639 319 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 MTND4P28-201ENST00000426217 387 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 RNU6-559P-201ENST00000516151 98 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 MIR2276-201ENST00000516886 89 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 CPDP1-201ENST00000579660 283 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 MIR5690-201ENST00000583739 73 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 AC096772.1-201ENST00000609146 564 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 uc_338.14-201ENST00000613162 166 ntBASIC4□□□□□ -1.77
CCDC144BQ3MJ40 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4□□□□□ -1.77
CCDC144BQ3MJ40 MAPK10-362ENST00000641864 4484 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 SNORA38.1-201ENST00000364172 131 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 MIR128-1-201ENST00000384921 82 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 MIR517A-201ENST00000385001 87 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 MIR634-201ENST00000385208 97 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 Z99755.1-201ENST00000414048 380 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 MTCO2P27-201ENST00000420740 428 ntBASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC144BQ3MJ40 MTND4P17-201ENST00000470444 350 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms