Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.39□□□□□ -2.19
SSX1Q16384 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.39□□□□□ -2.19
SSX1Q16384 MTND2P29-201ENST00000438595 412 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 CALM1P1-201ENST00000442082 433 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AC087884.1-201ENST00000469738 328 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AL121594.1-201ENST00000475906 575 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 MTND3P3-201ENST00000505004 126 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 RNA5SP337-201ENST00000517007 109 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AP003392.2-201ENST00000527269 208 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.39□□□□□ -2.19
SSX1Q16384 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.39□□□□□ -2.19
SSX1Q16384 MTND1P8-201ENST00000571424 950 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 MIR4285-201ENST00000581001 85 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AL138889.2-201ENST00000603883 242 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AC012360.2-201ENST00000609349 391 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AL359547.2-201ENST00000615810 418 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AL132822.1-201ENST00000617063 513 ntBASIC1.39□□□□□ -2.19
SSX1Q16384 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.39□□□□□ -2.19
SSX1Q16384 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SSX1Q16384 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SSX1Q16384 AC073343.1-201ENST00000328239 651 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SSX1Q16384 Y_RNA.40-201ENST00000362645 93 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 SNORD114-1-201ENST00000362705 72 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 SNORD115-3-201ENST00000363100 82 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 SNORD113-6-201ENST00000363345 75 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 SNORD14B-201ENST00000364533 90 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 RNU6-611P-201ENST00000384276 104 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MIR10A-201ENST00000385043 110 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MIR29C-201ENST00000385231 88 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MIR1262-201ENST00000408276 93 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 OR9R1P-201ENST00000412200 877 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AL358453.1-201ENST00000422522 250 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.38□□□□□ -2.19
SSX1Q16384 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.38□□□□□ -2.19
SSX1Q16384 AL606662.1-201ENST00000445763 553 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.38□□□□□ -2.19
SSX1Q16384 AC092436.1-201ENST00000506450 503 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AC096745.1-201ENST00000509945 370 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.38□□□□□ -2.19
SSX1Q16384 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.38□□□□□ -2.19
SSX1Q16384 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MTND4LP18-201ENST00000526864 291 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.38□□□□□ -2.19
SSX1Q16384 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.38□□□□□ -2.19
SSX1Q16384 AC022880.1-201ENST00000534017 973 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.38□□□□□ -2.19
SSX1Q16384 AP000811.1-201ENST00000603803 651 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MIR502-201ENST00000606349 86 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 Z82243.1-201ENST00000609432 473 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.38□□□□□ -2.19
SSX1Q16384 AC084768.2-201ENST00000622736 221 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AP002782.1-201ENST00000623107 614 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AC090517.3-201ENST00000625170 141 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 AC106754.1-201ENST00000562632 1513 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 FARSBP1-201ENST00000435808 1778 ntBASIC1.38□□□□□ -2.19
SSX1Q16384 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SSX1Q16384 RNU6-655P-201ENST00000362858 107 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 SNORD56.2-201ENST00000363242 71 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RNU4-1-201ENST00000363925 141 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RNU6-546P-201ENST00000383991 107 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 SNORD116-20-201ENST00000384529 92 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RNA5SP212-201ENST00000391223 107 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RNU2-23P-201ENST00000410545 195 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AL031779.1-201ENST00000415663 330 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC114491.1-201ENST00000416095 246 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.37□□□□□ -2.19
SSX1Q16384 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.37□□□□□ -2.19
SSX1Q16384 HMGN2P3-201ENST00000433603 273 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 HMGN2P5-201ENST00000436882 273 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.37□□□□□ -2.19
SSX1Q16384 DUXAP8-207ENST00000456786 622 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 PRELID3BP1-201ENST00000457142 540 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC112204.1-201ENST00000502591 103 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.37□□□□□ -2.19
SSX1Q16384 AC091489.2-201ENST00000566263 604 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.37□□□□□ -2.19
SSX1Q16384 DEFB131E-202ENST00000602581 683 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AL158032.1-201ENST00000605401 106 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC104010.1-201ENST00000616889 150 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC108479.2-201ENST00000617314 601 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.37□□□□□ -2.19
SSX1Q16384 MIR6852-201ENST00000621699 66 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC093648.1-201ENST00000623546 606 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 AC002543.1-201ENST00000299783 1954 ntBASIC1.37□□□□□ -2.19
SSX1Q16384 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SSX1Q16384 RNU6-1210P-201ENST00000363775 107 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 RNU6-944P-201ENST00000364023 107 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 RNU6-384P-201ENST00000364900 104 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 RNU6-533P-201ENST00000384144 107 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 CBX3P9-201ENST00000402326 552 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 RNA5SP390-201ENST00000410191 113 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SSX1Q16384 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX1Q16384 USP9YP18-201ENST00000425912 695 ntBASIC1.36□□□□□ -2.19
SSX1Q16384 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms