Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 MIR4782-201ENST00000577987 79 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.94□□□□□ -2.1
SF3A2Q15428 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.94□□□□□ -2.1
SF3A2Q15428 AC004223.2-201ENST00000590309 544 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 WISP1-OT1-201ENST00000602893 642 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AL022161.1-201ENST00000604390 213 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AL138963.2-201ENST00000605137 226 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC245008.1-201ENST00000608123 476 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 MIR8081-201ENST00000611533 95 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SF3A2Q15428 AC009233.1-201ENST00000616477 371 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AC104010.1-201ENST00000616889 150 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SF3A2Q15428 MIR6134-201ENST00000617606 109 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 AL031601.2-202ENST00000622650 282 ntBASIC1.94□□□□□ -2.1
SF3A2Q15428 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SF3A2Q15428 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SF3A2Q15428 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
SF3A2Q15428 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
SF3A2Q15428 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 RNU6-1280P-201ENST00000365211 107 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 SMIM11P1-201ENST00000369586 178 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 RNU6-533P-201ENST00000384144 107 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 RNU6-748P-201ENST00000384648 107 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 RPL23AP39-201ENST00000415533 405 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 RPS15AP12-201ENST00000419498 388 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.93□□□□□ -2.1
SF3A2Q15428 RPS27AP14-201ENST00000422868 454 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.93□□□□□ -2.1
SF3A2Q15428 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.93□□□□□ -2.1
SF3A2Q15428 RPL31P3-201ENST00000458430 332 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 RPL36AP48-201ENST00000485521 314 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.93□□□□□ -2.1
SF3A2Q15428 AC116655.1-201ENST00000508324 901 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AC022616.6-201ENST00000520479 119 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.93□□□□□ -2.1
SF3A2Q15428 CYCSP26-201ENST00000534107 320 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.93□□□□□ -2.1
SF3A2Q15428 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AC091489.2-201ENST00000566263 604 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.93□□□□□ -2.1
SF3A2Q15428 AC012213.3-201ENST00000577199 777 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 MIR3118-1-201ENST00000581787 76 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AL590229.1-201ENST00000603497 542 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AC064807.4-201ENST00000607201 407 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 AC091953.2-201ENST00000623979 160 ntBASIC1.93□□□□□ -2.1
SF3A2Q15428 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.93□□□□□ -2.1
SF3A2Q15428 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
SF3A2Q15428 RNU1-72P-201ENST00000362976 153 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 MT-TH-201ENST00000387441 69 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AL133475.1-201ENST00000404414 305 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 RN7SKP158-201ENST00000410453 326 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC016907.1-201ENST00000419483 435 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 Z99497.1-201ENST00000421282 135 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC007283.2-201ENST00000424739 197 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AL512286.1-201ENST00000439244 400 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SF3A2Q15428 AL590365.1-201ENST00000450788 243 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SF3A2Q15428 KATNBL1P6-201ENST00000453433 915 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC023194.1-201ENST00000493084 308 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 RPL22P13-201ENST00000493291 347 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.92□□□□□ -2.1
SF3A2Q15428 RNU6-1003P-201ENST00000517099 105 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC106038.2-201ENST00000520706 568 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.92□□□□□ -2.1
SF3A2Q15428 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.92□□□□□ -2.1
SF3A2Q15428 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.92□□□□□ -2.1
SF3A2Q15428 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.92□□□□□ -2.1
SF3A2Q15428 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.92□□□□□ -2.1
SF3A2Q15428 MIR5697-201ENST00000578045 78 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 NBR2-204ENST00000587322 63 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC073114.1-201ENST00000612027 490 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AL161423.1-201ENST00000613700 262 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 MIR7844-201ENST00000616161 122 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 Z69908.1-201ENST00000622603 247 ntBASIC1.92□□□□□ -2.1
SF3A2Q15428 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.92□□□□□ -2.1
SF3A2Q15428 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.92□□□□□ -2.1
SF3A2Q15428 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.92□□□□□ -2.1
SF3A2Q15428 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.92□□□□□ -2.1
SF3A2Q15428 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SF3A2Q15428 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SF3A2Q15428 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SF3A2Q15428 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
SF3A2Q15428 RNU5F-7P-201ENST00000363696 115 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 RNU6-501P-201ENST00000364072 100 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 SNORA26.8-201ENST00000391306 124 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 RNU2-40P-201ENST00000410833 196 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
SF3A2Q15428 AC092809.3-201ENST00000415453 231 ntBASIC1.91□□□□□ -2.1
SF3A2Q15428 AC097463.2-201ENST00000421074 142 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms