Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC010265.1-201ENST00000513509 211 ntBASIC4□□□□□ -1.77
SSRP1Q08945 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4□□□□□ -1.77
SSRP1Q08945 AP000867.2-201ENST00000532468 320 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4□□□□□ -1.77
SSRP1Q08945 MTCO3P13-201ENST00000577757 781 ntBASIC4□□□□□ -1.77
SSRP1Q08945 MIR3922-201ENST00000585192 84 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AC020895.1-201ENST00000595362 272 ntBASIC4□□□□□ -1.77
SSRP1Q08945 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4□□□□□ -1.77
SSRP1Q08945 VN1R107P-201ENST00000601784 209 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AL360085.1-201ENST00000604713 532 ntBASIC4□□□□□ -1.77
SSRP1Q08945 RNVU1-4-201ENST00000612985 164 ntBASIC4□□□□□ -1.77
SSRP1Q08945 MIR6075-201ENST00000620782 95 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4□□□□□ -1.77
SSRP1Q08945 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SSRP1Q08945 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SSRP1Q08945 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSRP1Q08945 AL136164.4-201ENST00000625013 2135 ntBASIC4□□□□□ -1.77
SSRP1Q08945 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.99□□□□□ -1.77
SSRP1Q08945 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSRP1Q08945 Y_RNA.252-201ENST00000364556 101 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 MIR606-201ENST00000384851 96 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 SNORD17-201ENST00000390930 237 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.99□□□□□ -1.77
SSRP1Q08945 AC096664.2-201ENST00000411843 406 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 RPS29P4-201ENST00000414733 161 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.99□□□□□ -1.77
SSRP1Q08945 AP000907.1-201ENST00000428428 510 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.99□□□□□ -1.77
SSRP1Q08945 AC091286.1-201ENST00000431233 461 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.99□□□□□ -1.77
SSRP1Q08945 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.99□□□□□ -1.77
SSRP1Q08945 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.99□□□□□ -1.77
SSRP1Q08945 RBMY2UP-201ENST00000453474 324 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 RPL23AP49-201ENST00000492925 468 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 RN7SKP295-201ENST00000517264 153 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.99□□□□□ -1.77
SSRP1Q08945 MIR4425-201ENST00000580572 84 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 HMGN2P15-201ENST00000585707 270 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AC110741.2-201ENST00000605278 268 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AC006111.3-201ENST00000622137 383 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 AC090617.7-201ENST00000623952 126 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSRP1Q08945 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSRP1Q08945 ADAM3A-203ENST00000461344 2157 ntBASIC3.99□□□□□ -1.77
SSRP1Q08945 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 RNU4-35P-201ENST00000362588 141 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 MIR200C-201ENST00000384980 68 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.98□□□□□ -1.77
SSRP1Q08945 MTND2P23-201ENST00000422990 651 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 AC005300.1-201ENST00000428401 373 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 AC068781.1-201ENST00000488231 618 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 NDUFB4P9-201ENST00000511646 388 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 RNU6-327P-201ENST00000516270 127 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 RNU6-699P-201ENST00000517081 110 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.98□□□□□ -1.77
SSRP1Q08945 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 AC021739.1-201ENST00000559631 174 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SSRP1Q08945 AC024220.1-201ENST00000603675 484 ntBASIC3.98□□□□□ -1.77
SSRP1Q08945 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.98□□□□□ -1.77
SSRP1Q08945 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
SSRP1Q08945 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSRP1Q08945 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSRP1Q08945 MIR30E-201ENST00000362104 92 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 RNU6-527P-201ENST00000363425 104 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 RNU6-1280P-201ENST00000365211 107 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 RNU6-198P-201ENST00000384258 104 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 RNU6-1160P-201ENST00000384546 104 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSRP1Q08945 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSRP1Q08945 RNA5SP44-201ENST00000410446 133 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSRP1Q08945 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.97□□□□□ -1.77
SSRP1Q08945 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.97□□□□□ -1.77
SSRP1Q08945 MTND3P9-201ENST00000429526 346 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.97□□□□□ -1.77
SSRP1Q08945 CYCSP32-201ENST00000440548 321 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSRP1Q08945 NIPA2P5-201ENST00000452282 464 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 RPL23AP67-201ENST00000465341 474 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 FO393415.2-201ENST00000480085 343 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.97□□□□□ -1.77
SSRP1Q08945 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.97□□□□□ -1.77
SSRP1Q08945 Y_RNA.661-201ENST00000516003 99 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 SNORA31.18-201ENST00000517043 134 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.97□□□□□ -1.77
SSRP1Q08945 BNIP3P16-201ENST00000589779 534 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 AC006557.5-201ENST00000603126 811 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 AL355802.3-201ENST00000607571 545 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.97□□□□□ -1.77
SSRP1Q08945 AC083806.3-201ENST00000614016 455 ntBASIC3.97□□□□□ -1.77
SSRP1Q08945 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSRP1Q08945 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSRP1Q08945 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SSRP1Q08945 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.96□□□□□ -1.77
SSRP1Q08945 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms