Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC108729.1-201ENST00000487812 947 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.24□□□□□ -2.45
TFF3Q07654 RNA5SP255-201ENST00000516370 107 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 RNA5SP168-201ENST00000516642 112 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.24□□□□□ -2.45
TFF3Q07654 CLIC4P2-201ENST00000601934 717 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 AC092354.1-201ENST00000606057 376 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 RNU4-5P-201ENST00000607255 135 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 AC098614.4-201ENST00000607601 462 ntBASIC-0.24□□□□□ -2.45
TFF3Q07654 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.24□□□□□ -2.45
TFF3Q07654 U8.7-201ENST00000364940 136 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 RNU2-49P-201ENST00000410666 184 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.25□□□□□ -2.45
TFF3Q07654 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.25□□□□□ -2.45
TFF3Q07654 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.25□□□□□ -2.45
TFF3Q07654 MRPS17P3-201ENST00000465453 385 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.25□□□□□ -2.45
TFF3Q07654 SCARNA1-201ENST00000517138 166 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.25□□□□□ -2.45
TFF3Q07654 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.25□□□□□ -2.45
TFF3Q07654 AP000403.1-201ENST00000603349 851 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 AC007349.4-201ENST00000608114 532 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.25□□□□□ -2.45
TFF3Q07654 AC090517.2-201ENST00000614966 680 ntBASIC-0.25□□□□□ -2.45
TFF3Q07654 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.25□□□□□ -2.45
TFF3Q07654 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 UBE2Q2P1-202ENST00000354771 883 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 RNU6-989P-201ENST00000362756 107 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 MTND2P19-201ENST00000449129 1012 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.26□□□□□ -2.45
TFF3Q07654 RN7SKP88-201ENST00000516847 250 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.26□□□□□ -2.45
TFF3Q07654 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.26□□□□□ -2.45
TFF3Q07654 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.26□□□□□ -2.45
TFF3Q07654 AL158211.1-201ENST00000566763 763 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 MIR4290-201ENST00000583807 95 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AL391813.1-201ENST00000603098 260 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AC009237.15-201ENST00000610252 501 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 7SK.8-201ENST00000612110 250 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.26□□□□□ -2.45
TFF3Q07654 7SK.11-201ENST00000615477 250 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 7SK.13-201ENST00000622040 250 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AC006001.4-201ENST00000622243 395 ntBASIC-0.26□□□□□ -2.45
TFF3Q07654 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
TFF3Q07654 SNRPEP3-201ENST00000338402 276 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 RNU6-833P-201ENST00000363486 107 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 RNU4-48P-201ENST00000365559 182 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 MIR597-201ENST00000384968 97 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.27□□□□□ -2.45
TFF3Q07654 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC-0.27□□□□□ -2.45
TFF3Q07654 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.27□□□□□ -2.45
TFF3Q07654 AL161788.1-201ENST00000441805 169 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 RPL26P26-201ENST00000480251 434 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 RNF138P1-201ENST00000502765 546 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 BOLA3P3-201ENST00000505182 232 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.27□□□□□ -2.45
TFF3Q07654 SNORA70.22-201ENST00000517160 124 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 CYB5AP5-201ENST00000549779 389 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 AC025423.5-201ENST00000550230 219 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.27□□□□□ -2.45
TFF3Q07654 AC007151.1-201ENST00000572774 483 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 MIR4765-201ENST00000585007 77 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 AC079791.1-201ENST00000605356 973 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 AP000238.1-201ENST00000608759 426 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.27□□□□□ -2.45
TFF3Q07654 MIR101-1-201ENST00000362265 75 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 RNU4-73P-201ENST00000363164 141 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
TFF3Q07654 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
TFF3Q07654 SNORD12-201ENST00000391002 90 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AL355615.1-201ENST00000406187 641 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.28□□□□□ -2.45
TFF3Q07654 NCOR1P3-201ENST00000420479 303 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 Z99497.1-201ENST00000421282 135 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.28□□□□□ -2.45
TFF3Q07654 MTCO1P53-201ENST00000441633 699 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.28□□□□□ -2.45
TFF3Q07654 AC104689.1-201ENST00000473356 768 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.28□□□□□ -2.45
TFF3Q07654 HMGB1P29-201ENST00000505659 499 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 RNA5SP227-201ENST00000516184 113 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AL121579.1-201ENST00000555129 305 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.28□□□□□ -2.45
TFF3Q07654 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.28□□□□□ -2.45
TFF3Q07654 MIR4764-201ENST00000580680 88 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.28□□□□□ -2.45
TFF3Q07654 AP000860.1-201ENST00000605250 559 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 uc_338.6-201ENST00000613544 171 ntBASIC-0.28□□□□□ -2.45
TFF3Q07654 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.28□□□□□ -2.46
TFF3Q07654 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
TFF3Q07654 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
TFF3Q07654 MIR604-201ENST00000384880 94 ntBASIC-0.29□□□□□ -2.46
TFF3Q07654 MIR1290-201ENST00000408735 78 ntBASIC-0.29□□□□□ -2.46
TFF3Q07654 AC063976.4-201ENST00000421971 163 ntBASIC-0.29□□□□□ -2.46
TFF3Q07654 SNRPEP9-201ENST00000436794 238 ntBASIC-0.29□□□□□ -2.46
TFF3Q07654 HMGN2P34-201ENST00000437647 269 ntBASIC-0.29□□□□□ -2.46
TFF3Q07654 AC010409.1-201ENST00000487382 476 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms