Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
IRF9Q00978 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
IRF9Q00978 ADAM3A-203ENST00000461344 2157 ntBASIC3.66□□□□□ -1.82
IRF9Q00978 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
IRF9Q00978 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
IRF9Q00978 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
IRF9Q00978 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.65□□□□□ -1.82
IRF9Q00978 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
IRF9Q00978 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 RNU6-1280P-201ENST00000365211 107 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 RNA5SP283-201ENST00000365604 119 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 MIR3074-201ENST00000384885 81 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.65□□□□□ -1.83
IRF9Q00978 Z98941.1-201ENST00000407764 100 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 RNA5SP494-201ENST00000410653 129 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 RNU6-1245P-201ENST00000411130 106 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
IRF9Q00978 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
IRF9Q00978 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.65□□□□□ -1.83
IRF9Q00978 AC005300.1-201ENST00000428401 373 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.65□□□□□ -1.83
IRF9Q00978 snoU13.28-201ENST00000459235 104 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 RNU7-169P-201ENST00000459456 61 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 AC110794.1-201ENST00000505816 425 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.65□□□□□ -1.83
IRF9Q00978 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.65□□□□□ -1.83
IRF9Q00978 CR383656.8-201ENST00000549046 145 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.65□□□□□ -1.83
IRF9Q00978 AC021739.1-201ENST00000559631 174 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 MIR3671-201ENST00000580455 88 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 MIR4503-201ENST00000582187 83 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 VN1R91P-201ENST00000594377 169 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 AL606490.9-201ENST00000603331 271 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
IRF9Q00978 PRR13P7-201ENST00000605538 430 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 ZNF72P-201ENST00000425869 1908 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
IRF9Q00978 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
IRF9Q00978 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
IRF9Q00978 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
IRF9Q00978 AC032011.1-201ENST00000611703 1549 ntBASIC3.65□□□□□ -1.83
IRF9Q00978 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.64□□□□□ -1.83
IRF9Q00978 AC009541.1-201ENST00000438279 2662 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
IRF9Q00978 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
IRF9Q00978 RNU6-858P-201ENST00000362436 107 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 Y_RNA.47-201ENST00000362697 108 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 Y_RNA.106-201ENST00000363189 100 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 Y_RNA.176-201ENST00000363815 109 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 Y_RNA.380-201ENST00000365663 111 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
IRF9Q00978 SAR1AP2-201ENST00000392696 594 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 MTCYBP2-201ENST00000407745 171 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 MIR1302-3-201ENST00000408128 138 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
IRF9Q00978 AL139247.1-201ENST00000422768 325 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 AC243964.1-201ENST00000441814 261 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 RNU6-581P-201ENST00000516214 105 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 RNU6-635P-201ENST00000516651 102 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.64□□□□□ -1.83
IRF9Q00978 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.64□□□□□ -1.83
IRF9Q00978 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.64□□□□□ -1.83
IRF9Q00978 AC087499.8-201ENST00000578406 226 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.64□□□□□ -1.83
IRF9Q00978 MIR3149-201ENST00000584629 83 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 HMGN2P15-201ENST00000585707 270 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 AC060766.3-201ENST00000591442 263 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 AL355297.3-201ENST00000604082 446 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.64□□□□□ -1.83
IRF9Q00978 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
IRF9Q00978 AC024581.2-201ENST00000619986 252 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.64□□□□□ -1.83
IRF9Q00978 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
IRF9Q00978 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
IRF9Q00978 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
IRF9Q00978 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.64□□□□□ -1.83
IRF9Q00978 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.64□□□□□ -1.83
IRF9Q00978 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.64□□□□□ -1.83
IRF9Q00978 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.63□□□□□ -1.83
IRF9Q00978 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.63□□□□□ -1.83
IRF9Q00978 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
IRF9Q00978 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
IRF9Q00978 SNORD56.1-201ENST00000362913 68 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 RNA5SP42-201ENST00000364278 115 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 Y_RNA.452-201ENST00000384202 108 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
IRF9Q00978 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
IRF9Q00978 SNORA69.1-201ENST00000390904 137 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AC074117.2-201ENST00000417130 397 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.63□□□□□ -1.83
IRF9Q00978 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.63□□□□□ -1.83
IRF9Q00978 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.63□□□□□ -1.83
IRF9Q00978 AL513124.1-201ENST00000450410 614 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 OR2AQ1P-201ENST00000451972 200 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 AC010655.3-201ENST00000478818 450 ntBASIC3.63□□□□□ -1.83
IRF9Q00978 RPL22P13-201ENST00000493291 347 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms