Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR95-201ENST00000385072 81 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MIR888-201ENST00000401186 77 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MTATP6P31-201ENST00000406985 692 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RNU2-64P-201ENST00000411315 191 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC092757.1-201ENST00000467293 467 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 AL391813.1-201ENST00000603098 260 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AP003973.1-201ENST00000604639 691 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AL161729.4-201ENST00000604650 476 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HSPG2P98160 RNA5SP205-201ENST00000364653 136 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RNU6-348P-201ENST00000384386 107 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MT-TC-201ENST00000387405 66 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.1□□□□□ -2.39
HSPG2P98160 RNU2-43P-201ENST00000410306 190 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AL359704.1-201ENST00000411586 781 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RPL26P27-201ENST00000414397 437 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 AL669831.1-202ENST00000428504 417 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC092685.1-201ENST00000447960 1243 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AL133373.1-201ENST00000497098 94 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC112206.3-201ENST00000514578 389 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.1□□□□□ -2.39
HSPG2P98160 AP003034.1-201ENST00000534621 422 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AL022067.1-201ENST00000602426 454 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MIR8074-201ENST00000615081 81 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MIR8065-201ENST00000620577 100 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC092125.1-201ENST00000562568 1995 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RNU6-271P-201ENST00000363858 105 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RNU6-110P-201ENST00000384508 104 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
HSPG2P98160 MIR938-201ENST00000401216 83 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MIR1267-201ENST00000408723 78 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.1□□□□□ -2.39
HSPG2P98160 AL441985.1-201ENST00000457727 251 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 OR5AK1P-201ENST00000524837 922 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 C1DP5-201ENST00000525775 383 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.1□□□□□ -2.39
HSPG2P98160 MIR4305-201ENST00000583252 102 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MTCO2P2-201ENST00000591258 225 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 VN1R82P-201ENST00000601481 356 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC092953.2-201ENST00000608000 699 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AP000238.1-201ENST00000608759 426 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC009233.1-201ENST00000616477 371 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC018926.3-201ENST00000618841 406 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
HSPG2P98160 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 Y_RNA.52-201ENST00000362760 96 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RNU6-884P-201ENST00000363889 107 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 MIR518D-201ENST00000385014 87 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 BTF3P8-201ENST00000414577 526 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC092634.2-201ENST00000428146 1010 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.1□□□□□ -2.39
HSPG2P98160 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.1□□□□□ -2.39
HSPG2P98160 AL049714.1-201ENST00000466686 347 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 RPL23AP54-201ENST00000495129 419 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 HMGN2P15-201ENST00000585707 270 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.1□□□□□ -2.39
HSPG2P98160 AC040168.1-201ENST00000623594 991 ntBASIC0.1□□□□□ -2.39
HSPG2P98160 Y_RNA.413-201ENST00000384007 102 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 MIR506-201ENST00000384998 124 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC078974.1-201ENST00000411597 223 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 Y_RNA.754-201ENST00000476024 102 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC145146.1-201ENST00000496370 254 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 RNU6-889P-201ENST00000517189 103 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.09□□□□□ -2.39
HSPG2P98160 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.09□□□□□ -2.39
HSPG2P98160 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.09□□□□□ -2.39
HSPG2P98160 BNIP3P23-201ENST00000599655 511 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 Y_RNA.790-201ENST00000614282 102 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 Y_RNA.782-201ENST00000614695 102 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC017037.3-201ENST00000625016 472 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
HSPG2P98160 MIR424-201ENST00000362227 98 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 MIR649-201ENST00000384843 97 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 RPS3AP37-201ENST00000419176 745 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.09□□□□□ -2.39
HSPG2P98160 RPL36P19-201ENST00000430744 301 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.09□□□□□ -2.39
HSPG2P98160 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
HSPG2P98160 CYP2C59P-201ENST00000457790 269 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 MRPS17P3-201ENST00000465453 385 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.09□□□□□ -2.39
HSPG2P98160 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.09□□□□□ -2.39
HSPG2P98160 ZNF705CP-201ENST00000530515 889 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AC073544.2-201ENST00000601155 540 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 BBIP1P1-201ENST00000602999 279 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AL713866.2-201ENST00000603579 219 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 AP001596.2-201ENST00000608410 312 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 uc_338.6-201ENST00000613544 171 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 MIR6130-201ENST00000619419 109 ntBASIC0.09□□□□□ -2.39
HSPG2P98160 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.09□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms