Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
PRKDCP78527 SNORD14D-201ENST00000384390 87 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 RNA5SP503-201ENST00000517047 117 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.15□□□□□ -2.39
PRKDCP78527 AC141557.1-201ENST00000540982 400 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 MIR6130-201ENST00000619419 109 ntBASIC0.15□□□□□ -2.39
PRKDCP78527 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
PRKDCP78527 RNU6-793P-201ENST00000384233 104 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 FABP5P14-201ENST00000437273 393 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 Y_RNA.644-201ENST00000459006 113 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 COX6CP6-201ENST00000490840 228 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC022493.2-201ENST00000506122 481 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.14□□□□□ -2.39
PRKDCP78527 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.14□□□□□ -2.39
PRKDCP78527 OR5AK1P-201ENST00000524837 922 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
PRKDCP78527 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 AC023158.1-201ENST00000561632 1025 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC018618.2-201ENST00000604770 446 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC009233.1-201ENST00000616477 371 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
PRKDCP78527 SNORA50A-201ENST00000384225 134 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 RNA5SP56-201ENST00000410277 118 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 RNU5A-7P-201ENST00000515979 116 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 RNU6-1004P-201ENST00000516584 111 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC090888.1-201ENST00000561335 1141 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 AP001180.6-201ENST00000584918 159 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 KATNBL1P5-201ENST00000605015 517 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC104465.1-201ENST00000611365 139 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 AC106800.4-201ENST00000614905 153 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC090772.4-201ENST00000623599 362 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 RNU6-112P-201ENST00000363599 104 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 RNU4-12P-201ENST00000365233 139 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC119618.1-201ENST00000434191 222 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC002381.1-201ENST00000447049 280 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AL096803.2-201ENST00000450032 677 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC092757.1-201ENST00000467293 467 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.14□□□□□ -2.39
PRKDCP78527 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 SCARNA3-201ENST00000517097 143 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AP001893.2-201ENST00000526949 202 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 AC009268.1-201ENST00000561352 1203 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.14□□□□□ -2.39
PRKDCP78527 AC073410.2-201ENST00000603240 332 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 AC024257.5-201ENST00000612739 531 ntBASIC0.14□□□□□ -2.39
PRKDCP78527 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
PRKDCP78527 RNU2-64P-201ENST00000411315 191 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.13□□□□□ -2.39
PRKDCP78527 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 RPS26P45-201ENST00000471748 340 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 AC010460.2-201ENST00000509054 677 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.13□□□□□ -2.39
PRKDCP78527 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.13□□□□□ -2.39
PRKDCP78527 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 U4.2-201ENST00000618561 85 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 Y_RNA.25-201ENST00000362528 102 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 RNU6-950P-201ENST00000384651 107 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 PIGPP2-201ENST00000411569 458 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 AL049734.2-201ENST00000441066 616 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.13□□□□□ -2.39
PRKDCP78527 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 AC026271.5-201ENST00000577873 130 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 MIR4645-201ENST00000583158 77 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AL031176.1-201ENST00000604554 466 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AC239868.4-201ENST00000608318 671 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AL365204.3-201ENST00000612448 685 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AL109659.3-201ENST00000624985 950 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 RNU6-1065P-201ENST00000384513 106 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 RPS3AP37-201ENST00000419176 745 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.13□□□□□ -2.39
PRKDCP78527 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.13□□□□□ -2.39
PRKDCP78527 AC125611.1-201ENST00000549563 229 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AC090330.1-201ENST00000588646 764 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 Z75746.1-201ENST00000440243 2080 ntBASIC0.13□□□□□ -2.39
PRKDCP78527 AL049641.1-201ENST00000441055 1948 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 MIR1468-201ENST00000410600 86 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 VPS26BP1-201ENST00000417155 755 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 AC027119.1-201ENST00000440877 241 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.12□□□□□ -2.39
PRKDCP78527 AC025465.3-201ENST00000510570 311 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 SNORA31.4-201ENST00000516049 129 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.12□□□□□ -2.39
PRKDCP78527 HMGB1P33-201ENST00000563485 527 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
PRKDCP78527 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
PRKDCP78527 RNU6-486P-201ENST00000363116 107 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 RNU6-270P-201ENST00000364131 105 ntBASIC0.12□□□□□ -2.39
PRKDCP78527 RNU6-110P-201ENST00000384508 104 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms