Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.47□□□□□ -2.01
LMO4P61968 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.47□□□□□ -2.01
LMO4P61968 AC093012.1-202ENST00000549403 582 ntBASIC2.47□□□□□ -2.01
LMO4P61968 SNRPGP18-201ENST00000553000 214 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.47□□□□□ -2.01
LMO4P61968 AC008737.2-201ENST00000599446 118 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL133393.1-201ENST00000603277 287 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL138889.2-201ENST00000603883 242 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AL138726.1-201ENST00000614873 333 ntBASIC2.47□□□□□ -2.01
LMO4P61968 AC007318.2-201ENST00000620999 243 ntBASIC2.47□□□□□ -2.01
LMO4P61968 SNORA50A-202ENST00000629536 136 ntBASIC2.47□□□□□ -2.01
LMO4P61968 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LMO4P61968 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LMO4P61968 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMO4P61968 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
LMO4P61968 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
LMO4P61968 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.46□□□□□ -2.01
LMO4P61968 HSPA8P4-201ENST00000511877 1920 ntBASIC2.46□□□□□ -2.02
LMO4P61968 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LMO4P61968 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LMO4P61968 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.46□□□□□ -2.02
LMO4P61968 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
LMO4P61968 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
LMO4P61968 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LMO4P61968 SNORD116-11-201ENST00000383882 92 ntBASIC2.46□□□□□ -2.02
LMO4P61968 Y_RNA.399-201ENST00000383955 105 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RNU6-639P-201ENST00000384074 107 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RNU6-190P-201ENST00000384154 102 ntBASIC2.46□□□□□ -2.02
LMO4P61968 Y_RNA.459-201ENST00000384251 102 ntBASIC2.46□□□□□ -2.02
LMO4P61968 Y_RNA.482-201ENST00000384377 111 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RNU6-601P-201ENST00000384540 107 ntBASIC2.46□□□□□ -2.02
LMO4P61968 SNORA48.8-201ENST00000391324 134 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AL139039.1-201ENST00000401900 692 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AL513331.1-201ENST00000411908 397 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RPL32P35-201ENST00000415214 394 ntBASIC2.46□□□□□ -2.02
LMO4P61968 Z85995.1-201ENST00000415547 335 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RPLP0P7-201ENST00000416050 667 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AC113618.1-201ENST00000416747 285 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 Z82210.1-201ENST00000440037 231 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.46□□□□□ -2.02
LMO4P61968 NEFMP1-201ENST00000443423 1006 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 AC010099.1-201ENST00000455434 375 ntBASIC2.46□□□□□ -2.02
LMO4P61968 ELOCP24-201ENST00000456370 334 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RPL30P15-201ENST00000457129 321 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 AC117503.1-201ENST00000472241 394 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RPS20P22-201ENST00000473700 357 ntBASIC2.46□□□□□ -2.02
LMO4P61968 UBE2DNL-203ENST00000474922 222 ntBASIC2.46□□□□□ -2.02
LMO4P61968 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.46□□□□□ -2.02
LMO4P61968 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.46□□□□□ -2.02
LMO4P61968 RNU2-69P-201ENST00000516061 100 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RNU6-1282P-201ENST00000516735 96 ntBASIC2.46□□□□□ -2.02
LMO4P61968 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.46□□□□□ -2.02
LMO4P61968 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.46□□□□□ -2.02
LMO4P61968 TRAV28-201ENST00000557548 323 ntBASIC2.46□□□□□ -2.02
LMO4P61968 MIR3671-201ENST00000580455 88 ntBASIC2.46□□□□□ -2.02
LMO4P61968 MIR5692C1-201ENST00000585309 91 ntBASIC2.46□□□□□ -2.02
LMO4P61968 ELOCP29-201ENST00000588193 334 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 CYP2C61P-201ENST00000604072 290 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AL158032.1-201ENST00000605401 106 ntBASIC2.46□□□□□ -2.02
LMO4P61968 U2.17-201ENST00000611454 95 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AC098657.3-201ENST00000620434 263 ntBASIC2.46□□□□□ -2.02
LMO4P61968 AC007998.5-201ENST00000622938 237 ntBASIC2.46□□□□□ -2.02
LMO4P61968 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 MTND5P19-201ENST00000424872 1794 ntBASIC2.46□□□□□ -2.02
LMO4P61968 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
LMO4P61968 MTND5P10-201ENST00000603719 1809 ntBASIC2.45□□□□□ -2.02
LMO4P61968 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LMO4P61968 Y_RNA.28-201ENST00000362554 111 ntBASIC2.45□□□□□ -2.02
LMO4P61968 CD24P4-201ENST00000382840 243 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNU6-1027P-201ENST00000383998 107 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNU6-393P-201ENST00000384475 107 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNU6-1035P-201ENST00000384477 107 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNU6-14P-201ENST00000384630 106 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNU6-310P-201ENST00000384655 107 ntBASIC2.45□□□□□ -2.02
LMO4P61968 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
LMO4P61968 Y_RNA.646-201ENST00000410980 101 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNA5SP111-201ENST00000411386 101 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RPL7P10-201ENST00000417407 739 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.45□□□□□ -2.02
LMO4P61968 PIGFP3-201ENST00000441918 722 ntBASIC2.45□□□□□ -2.02
LMO4P61968 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.45□□□□□ -2.02
LMO4P61968 RNU7-167P-201ENST00000459160 62 ntBASIC2.45□□□□□ -2.02
LMO4P61968 MIR2053-201ENST00000459295 91 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC087884.1-201ENST00000469738 328 ntBASIC2.45□□□□□ -2.02
LMO4P61968 TRBV1-201ENST00000476502 284 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC021146.2-201ENST00000504736 556 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
LMO4P61968 PTP4A1P4-201ENST00000512479 322 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC010265.1-201ENST00000513509 211 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC091826.1-201ENST00000514065 313 ntBASIC2.45□□□□□ -2.02
LMO4P61968 SMURF2P1-201ENST00000514992 481 ntBASIC2.45□□□□□ -2.02
LMO4P61968 SNORA14.1-201ENST00000516113 141 ntBASIC2.45□□□□□ -2.02
LMO4P61968 Y_RNA.689-201ENST00000516589 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms