Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC021171.1-201ENST00000603137 706 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 AC025754.2-201ENST00000606491 432 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 AC022513.1-201ENST00000624512 117 ntBASIC0.55□□□□□ -2.32
CKS1BP61024 RNU6-97P-201ENST00000363387 104 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 RNU6-353P-201ENST00000364266 108 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 RNU6-512P-201ENST00000364438 103 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CKS1BP61024 TPMTP2-201ENST00000414372 726 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CKS1BP61024 RPS15AP12-201ENST00000419498 388 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 BX119904.4-201ENST00000424402 301 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.54□□□□□ -2.32
CKS1BP61024 RPL30P6-201ENST00000475925 342 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.54□□□□□ -2.32
CKS1BP61024 AC093809.1-201ENST00000509155 340 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 RNU6-322P-201ENST00000516010 103 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.54□□□□□ -2.32
CKS1BP61024 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.54□□□□□ -2.32
CKS1BP61024 AC015712.3-201ENST00000559380 164 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 AC136618.2-201ENST00000575091 400 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.54□□□□□ -2.32
CKS1BP61024 AC018926.1-201ENST00000616335 435 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 AL357080.1-201ENST00000617394 239 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 AC123767.1-202ENST00000620407 817 ntBASIC0.54□□□□□ -2.32
CKS1BP61024 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CKS1BP61024 RNU6-655P-201ENST00000362858 107 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 Y_RNA.327-201ENST00000365201 102 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 RNU6-114P-201ENST00000384704 105 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 MIR764-201ENST00000390811 85 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.53□□□□□ -2.32
CKS1BP61024 MTATP6P30-201ENST00000443540 664 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CKS1BP61024 RNA5SP269-201ENST00000459032 137 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 RNU6-991P-201ENST00000516168 107 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.53□□□□□ -2.32
CKS1BP61024 AP001189.2-201ENST00000527320 189 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 MIR5094-201ENST00000578766 85 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 AC008751.2-201ENST00000597885 980 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 FAM71BP1-201ENST00000604431 523 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
CKS1BP61024 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CKS1BP61024 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CKS1BP61024 RNU6-216P-201ENST00000363282 104 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 MIR222-201ENST00000384992 110 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 RNU11-5P-201ENST00000391216 129 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 CBX3P9-201ENST00000402326 552 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.52□□□□□ -2.33
CKS1BP61024 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CKS1BP61024 AL590623.1-201ENST00000427864 105 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 AC092473.1-201ENST00000441098 221 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.52□□□□□ -2.33
CKS1BP61024 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.52□□□□□ -2.33
CKS1BP61024 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.52□□□□□ -2.33
CKS1BP61024 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.52□□□□□ -2.33
CKS1BP61024 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.52□□□□□ -2.33
CKS1BP61024 AC004817.2-201ENST00000561794 651 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 AC253576.2-201ENST00000618815 580 ntBASIC0.52□□□□□ -2.33
CKS1BP61024 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.52□□□□□ -2.33
CKS1BP61024 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CKS1BP61024 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.51□□□□□ -2.33
CKS1BP61024 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CKS1BP61024 RNU6-1210P-201ENST00000363775 107 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 MIR520A-201ENST00000384862 85 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 MTCO1P56-201ENST00000401674 224 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 FGF7P8-201ENST00000402994 292 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 FTH1P15-201ENST00000406984 280 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.51□□□□□ -2.33
CKS1BP61024 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
CKS1BP61024 AC104651.1-201ENST00000427559 735 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 TIMM9P1-201ENST00000436122 256 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 RNU1-131P-201ENST00000458943 161 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.51□□□□□ -2.33
CKS1BP61024 PDCD5P2-201ENST00000507570 312 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 SNORA31.16-201ENST00000516773 139 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.51□□□□□ -2.33
CKS1BP61024 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CKS1BP61024 AC093012.1-202ENST00000549403 582 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.51□□□□□ -2.33
CKS1BP61024 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.51□□□□□ -2.33
CKS1BP61024 VN1R83P-201ENST00000595685 445 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.51□□□□□ -2.33
CKS1BP61024 AP001981.2-201ENST00000603241 418 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 AC080078.3-201ENST00000605407 463 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 AL589994.2-201ENST00000621124 579 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 AL445264.1-201ENST00000621719 171 ntBASIC0.51□□□□□ -2.33
CKS1BP61024 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.51□□□□□ -2.33
CKS1BP61024 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CKS1BP61024 MTND4P16-201ENST00000466108 1367 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 SNORD114-24-201ENST00000365029 72 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 RNU6-487P-201ENST00000365430 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms