Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORA43.4-201ENST00000629559 138 ntBASIC3.71□□□□□ -1.82
GFRA1P56159 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.71□□□□□ -1.82
GFRA1P56159 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA1P56159 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA1P56159 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
GFRA1P56159 AF127577.6-201ENST00000623352 2191 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 AC007496.3-201ENST00000624987 3443 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 RBBP8P1-201ENST00000449447 1844 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 AC092268.1-201ENST00000342691 405 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 MIR448-201ENST00000362131 111 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 SNORA60-201ENST00000362396 134 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 RNU6-379P-201ENST00000363813 104 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 Y_RNA.483-201ENST00000384380 101 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 MT-TW-201ENST00000387382 68 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 RNU6-907P-201ENST00000390924 102 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 SNORD78.2-201ENST00000391076 69 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 SNORA57.1-201ENST00000391227 145 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 RNA5SP38-201ENST00000410750 119 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 RNU6-130P-201ENST00000411112 103 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC245291.1-201ENST00000419501 328 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 PTGES3P4-201ENST00000426243 356 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC078809.1-201ENST00000427601 140 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AL117339.2-201ENST00000430475 180 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 BX679664.1-201ENST00000434429 253 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.7□□□□□ -1.82
GFRA1P56159 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.7□□□□□ -1.82
GFRA1P56159 AL714022.1-201ENST00000439897 151 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 LINC01399-202ENST00000458450 244 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 RNU6-1132P-201ENST00000459214 107 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AP001025.1-201ENST00000486139 332 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC025465.3-201ENST00000510570 311 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 VWA8P1-201ENST00000510889 176 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 SNORD19.2-201ENST00000516978 73 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 AC023157.2-201ENST00000540596 141 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.7□□□□□ -1.82
GFRA1P56159 MIR5571-201ENST00000577998 113 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC090897.2-201ENST00000581715 130 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 MIR5684-201ENST00000585074 65 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 AC096772.1-201ENST00000609146 564 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AC006111.3-201ENST00000622137 383 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 AP001148.1-201ENST00000624124 2359 ntBASIC3.7□□□□□ -1.82
GFRA1P56159 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
GFRA1P56159 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GFRA1P56159 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.7□□□□□ -1.82
GFRA1P56159 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.69□□□□□ -1.82
GFRA1P56159 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
GFRA1P56159 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 AC010615.1-201ENST00000594254 1764 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GFRA1P56159 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.69□□□□□ -1.82
GFRA1P56159 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
GFRA1P56159 RNU5B-2P-201ENST00000363036 113 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 Y_RNA.447-201ENST00000384184 113 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 RPL21P65-201ENST00000406094 466 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 RPL39P29-201ENST00000447779 157 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 SSXP4-201ENST00000451349 245 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.69□□□□□ -1.82
GFRA1P56159 RNU7-23P-201ENST00000459465 62 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 RPS26P28-201ENST00000470806 348 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GFRA1P56159 RNU6-570P-201ENST00000517051 105 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
GFRA1P56159 AC021231.3-201ENST00000558497 370 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.69□□□□□ -1.82
GFRA1P56159 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 VN1R85P-201ENST00000601587 426 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 MIR432-201ENST00000606207 94 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 Y_RNA.772-201ENST00000606692 102 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 MIR7154-201ENST00000620673 73 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.69□□□□□ -1.82
GFRA1P56159 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GFRA1P56159 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GFRA1P56159 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.69□□□□□ -1.82
GFRA1P56159 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GFRA1P56159 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.69□□□□□ -1.82
GFRA1P56159 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GFRA1P56159 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.68□□□□□ -1.82
GFRA1P56159 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms