Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL121890.1-201ENST00000435457 205 ntBASIC1.8□□□□□ -2.12
CDH6P55285 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH6P55285 snoU109.1-201ENST00000459339 135 ntBASIC1.8□□□□□ -2.12
CDH6P55285 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.8□□□□□ -2.12
CDH6P55285 RNU6-667P-201ENST00000517186 102 ntBASIC1.8□□□□□ -2.12
CDH6P55285 MTND2P32-201ENST00000521584 1038 ntBASIC1.8□□□□□ -2.12
CDH6P55285 OR5AL2P-201ENST00000532185 920 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH6P55285 ELOCP32-201ENST00000548625 324 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.8□□□□□ -2.12
CDH6P55285 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.8□□□□□ -2.12
CDH6P55285 AP002360.4-201ENST00000606980 481 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AC027449.1-201ENST00000608890 407 ntBASIC1.8□□□□□ -2.12
CDH6P55285 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
CDH6P55285 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.8□□□□□ -2.12
CDH6P55285 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDH6P55285 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.8□□□□□ -2.12
CDH6P55285 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDH6P55285 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.79□□□□□ -2.12
CDH6P55285 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CDH6P55285 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
CDH6P55285 RNU6-942P-201ENST00000363002 107 ntBASIC1.79□□□□□ -2.12
CDH6P55285 RNU6-72P-201ENST00000384285 79 ntBASIC1.79□□□□□ -2.12
CDH6P55285 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 Z73417.1-201ENST00000447373 778 ntBASIC1.79□□□□□ -2.12
CDH6P55285 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 AC006512.1-201ENST00000468816 291 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AC104564.1-201ENST00000493028 407 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH6P55285 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDH6P55285 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
CDH6P55285 RNA5SP337-201ENST00000517007 109 ntBASIC1.79□□□□□ -2.12
CDH6P55285 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH6P55285 AP003461.1-201ENST00000528866 78 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AK6P1-201ENST00000540219 478 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 AC091489.2-201ENST00000566263 604 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AC104581.2-201ENST00000572227 430 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH6P55285 AL138889.2-201ENST00000603883 242 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AC126118.1-201ENST00000607744 628 ntBASIC1.79□□□□□ -2.12
CDH6P55285 AL773524.1-201ENST00000614065 229 ntBASIC1.79□□□□□ -2.12
CDH6P55285 U6.42-201ENST00000618440 107 ntBASIC1.79□□□□□ -2.12
CDH6P55285 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.79□□□□□ -2.12
CDH6P55285 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDH6P55285 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDH6P55285 AC002543.1-201ENST00000299783 1954 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH6P55285 RNU6-529P-201ENST00000363383 104 ntBASIC1.78□□□□□ -2.12
CDH6P55285 RNU6-501P-201ENST00000364072 100 ntBASIC1.78□□□□□ -2.12
CDH6P55285 SNORA11.2-201ENST00000408318 127 ntBASIC1.78□□□□□ -2.12
CDH6P55285 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDH6P55285 AC137499.1-201ENST00000427602 88 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.78□□□□□ -2.12
CDH6P55285 AC010095.1-201ENST00000443543 144 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.78□□□□□ -2.12
CDH6P55285 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.78□□□□□ -2.12
CDH6P55285 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.78□□□□□ -2.12
CDH6P55285 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.78□□□□□ -2.12
CDH6P55285 SNORD11.1-201ENST00000459482 85 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.78□□□□□ -2.12
CDH6P55285 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH6P55285 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH6P55285 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDH6P55285 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.78□□□□□ -2.12
CDH6P55285 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.78□□□□□ -2.12
CDH6P55285 AP000763.2-201ENST00000540641 163 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH6P55285 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH6P55285 PCMTD1P2-201ENST00000565017 355 ntBASIC1.78□□□□□ -2.12
CDH6P55285 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.78□□□□□ -2.12
CDH6P55285 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.78□□□□□ -2.12
CDH6P55285 AL158827.2-201ENST00000602494 330 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AL158032.1-201ENST00000605401 106 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AC104010.1-201ENST00000616889 150 ntBASIC1.78□□□□□ -2.12
CDH6P55285 AL691447.3-201ENST00000635020 330 ntBASIC1.78□□□□□ -2.12
CDH6P55285 SNORD3E-201ENST00000362899 217 ntBASIC1.77□□□□□ -2.13
CDH6P55285 SNORD56.2-201ENST00000363242 71 ntBASIC1.77□□□□□ -2.13
CDH6P55285 RNU6-1214P-201ENST00000363650 109 ntBASIC1.77□□□□□ -2.13
CDH6P55285 RNU6-622P-201ENST00000384272 103 ntBASIC1.77□□□□□ -2.13
CDH6P55285 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
CDH6P55285 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
CDH6P55285 MTCYBP36-201ENST00000404146 440 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AC013410.2-201ENST00000422627 201 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AC007283.2-201ENST00000424739 197 ntBASIC1.77□□□□□ -2.13
CDH6P55285 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.77□□□□□ -2.13
CDH6P55285 AL365184.2-201ENST00000431139 435 ntBASIC1.77□□□□□ -2.13
CDH6P55285 MTCO3P5-201ENST00000433620 714 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AL590365.1-201ENST00000450788 243 ntBASIC1.77□□□□□ -2.13
CDH6P55285 PPP1R2P5-201ENST00000457256 603 ntBASIC1.77□□□□□ -2.13
CDH6P55285 YWHAEP4-201ENST00000505390 198 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AC091965.2-201ENST00000512324 613 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AC112206.3-201ENST00000514578 389 ntBASIC1.77□□□□□ -2.13
CDH6P55285 MRPS36P3-201ENST00000519284 130 ntBASIC1.77□□□□□ -2.13
CDH6P55285 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.77□□□□□ -2.13
CDH6P55285 AP003181.2-201ENST00000528941 181 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms