Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK1P53667 AC107401.1-201ENST00000503426 685 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 HMGB1P29-201ENST00000505659 499 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK1P53667 AC105417.1-201ENST00000514691 285 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.66□□□□□ -1.98
LIMK1P53667 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.66□□□□□ -1.98
LIMK1P53667 OR5AK4P-201ENST00000635912 903 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 AC241585.2-209ENST00000638217 143 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LIMK1P53667 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
LIMK1P53667 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LIMK1P53667 MTND5P30-201ENST00000452896 1731 ntBASIC2.65□□□□□ -1.98
LIMK1P53667 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.98
LIMK1P53667 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
LIMK1P53667 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
LIMK1P53667 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
LIMK1P53667 MTND5P26-201ENST00000426018 1752 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 Y_RNA.159-201ENST00000363674 87 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 RNU6-1103P-201ENST00000384150 107 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 Y_RNA.517-201ENST00000384551 106 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 RNU6-220P-201ENST00000390919 107 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 RNU4-46P-201ENST00000410818 138 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AC016831.2-201ENST00000417179 352 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AL356320.1-201ENST00000429616 163 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 Z98742.2-201ENST00000431564 187 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AL139415.2-201ENST00000431968 163 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.65□□□□□ -1.99
LIMK1P53667 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.65□□□□□ -1.99
LIMK1P53667 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.65□□□□□ -1.99
LIMK1P53667 AC104136.1-201ENST00000512969 394 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.65□□□□□ -1.99
LIMK1P53667 RNA5SP282-201ENST00000516355 108 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 ACA59.2-201ENST00000517061 156 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.65□□□□□ -1.99
LIMK1P53667 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.65□□□□□ -1.99
LIMK1P53667 AC245505.1-201ENST00000556398 224 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AC027176.1-201ENST00000560204 514 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 MIR4703-201ENST00000577728 79 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.65□□□□□ -1.99
LIMK1P53667 MIR4765-201ENST00000585007 77 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AP000787.2-201ENST00000604432 568 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 AL354950.2-201ENST00000617939 290 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 MIR6863-201ENST00000636112 90 ntBASIC2.65□□□□□ -1.99
LIMK1P53667 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.65□□□□□ -1.99
LIMK1P53667 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.99
LIMK1P53667 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LIMK1P53667 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LIMK1P53667 OR4G2P-201ENST00000328113 903 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 RNU6-45P-201ENST00000384471 107 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.64□□□□□ -1.99
LIMK1P53667 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LIMK1P53667 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LIMK1P53667 AC068050.1-201ENST00000394891 380 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 U3.37-201ENST00000408528 213 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 RNU2-29P-201ENST00000410423 189 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 RN7SKP223-201ENST00000410582 62 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 RNU6-1328P-201ENST00000410938 106 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 EEF1A1P40-201ENST00000412883 573 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AL031779.1-201ENST00000415663 330 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.64□□□□□ -1.99
LIMK1P53667 AC010975.2-201ENST00000427781 588 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.64□□□□□ -1.99
LIMK1P53667 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.64□□□□□ -1.99
LIMK1P53667 FABP5P14-201ENST00000437273 393 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 NDUFB1P2-201ENST00000449477 176 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC027673.1-201ENST00000456245 405 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC008571.1-201ENST00000467232 300 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AL121769.1-201ENST00000469473 401 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC092436.1-201ENST00000506450 503 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.64□□□□□ -1.99
LIMK1P53667 HMGB3P3-201ENST00000510526 400 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC074344.1-201ENST00000512823 224 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 SCARNA3-201ENST00000517097 143 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 OR5BN1P-201ENST00000532955 829 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.64□□□□□ -1.99
LIMK1P53667 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.64□□□□□ -1.99
LIMK1P53667 MIR5571-201ENST00000577998 113 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 MIR3199-1-201ENST00000582434 88 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC008752.3-201ENST00000588113 712 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AL391646.1-201ENST00000603860 190 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AP001486.3-201ENST00000615334 372 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 AC073534.2-201ENST00000620377 381 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 CR381653.2-201ENST00000624041 768 ntBASIC2.64□□□□□ -1.99
LIMK1P53667 RNU6-623P-201ENST00000363143 105 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 Y_RNA.318-201ENST00000365131 97 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 Y_RNA.381-201ENST00000365666 102 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 Y_RNA.409-201ENST00000383990 98 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LIMK1P53667 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.63□□□□□ -1.99
LIMK1P53667 AL360271.2-201ENST00000447710 161 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.63□□□□□ -1.99
LIMK1P53667 AL356010.1-201ENST00000456364 102 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 SNRPFP3-201ENST00000457792 225 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 MTAPP1-201ENST00000489154 819 ntBASIC2.63□□□□□ -1.99
LIMK1P53667 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms