Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MRE11P49959 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.98□□□□□ -1.77
MRE11P49959 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.98□□□□□ -1.77
MRE11P49959 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
MRE11P49959 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
MRE11P49959 RNU6-490P-201ENST00000362985 107 ntBASIC3.97□□□□□ -1.77
MRE11P49959 Y_RNA.557-201ENST00000384680 107 ntBASIC3.97□□□□□ -1.77
MRE11P49959 RNU6-293P-201ENST00000411259 106 ntBASIC3.97□□□□□ -1.77
MRE11P49959 HMGB3P2-201ENST00000411913 584 ntBASIC3.97□□□□□ -1.77
MRE11P49959 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.97□□□□□ -1.77
MRE11P49959 AC008267.5-201ENST00000424928 265 ntBASIC3.97□□□□□ -1.77
MRE11P49959 USMG5P1-201ENST00000425964 177 ntBASIC3.97□□□□□ -1.77
MRE11P49959 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
MRE11P49959 AL360271.2-201ENST00000447710 161 ntBASIC3.97□□□□□ -1.77
MRE11P49959 GSTA11P-201ENST00000452866 669 ntBASIC3.97□□□□□ -1.77
MRE11P49959 HMGN2P16-201ENST00000456802 261 ntBASIC3.97□□□□□ -1.77
MRE11P49959 RNU7-138P-201ENST00000459479 64 ntBASIC3.97□□□□□ -1.77
MRE11P49959 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.97□□□□□ -1.77
MRE11P49959 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.97□□□□□ -1.77
MRE11P49959 SCARNA16.2-201ENST00000516520 172 ntBASIC3.97□□□□□ -1.77
MRE11P49959 RNA5SP384-201ENST00000516615 116 ntBASIC3.97□□□□□ -1.77
MRE11P49959 AC023442.1-201ENST00000531247 422 ntBASIC3.97□□□□□ -1.77
MRE11P49959 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.97□□□□□ -1.77
MRE11P49959 VN1R107P-201ENST00000601784 209 ntBASIC3.97□□□□□ -1.77
MRE11P49959 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.97□□□□□ -1.77
MRE11P49959 AC093831.2-201ENST00000624393 3427 ntBASIC3.97□□□□□ -1.77
MRE11P49959 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MRE11P49959 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.97□□□□□ -1.77
MRE11P49959 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
MRE11P49959 U3.6-201ENST00000363622 211 ntBASIC3.96□□□□□ -1.78
MRE11P49959 RNU6-1059P-201ENST00000363752 98 ntBASIC3.96□□□□□ -1.78
MRE11P49959 DYNLT3P1-201ENST00000378574 347 ntBASIC3.96□□□□□ -1.78
MRE11P49959 RNU6-1074P-201ENST00000383995 104 ntBASIC3.96□□□□□ -1.78
MRE11P49959 Y_RNA.534-201ENST00000384599 112 ntBASIC3.96□□□□□ -1.78
MRE11P49959 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.96□□□□□ -1.78
MRE11P49959 UBE2V1P4-201ENST00000425374 344 ntBASIC3.96□□□□□ -1.78
MRE11P49959 AL645568.3-201ENST00000433683 316 ntBASIC3.96□□□□□ -1.78
MRE11P49959 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.96□□□□□ -1.78
MRE11P49959 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.96□□□□□ -1.78
MRE11P49959 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.96□□□□□ -1.78
MRE11P49959 RNU6-120P-201ENST00000516077 103 ntBASIC3.96□□□□□ -1.78
MRE11P49959 SCARNA20.6-201ENST00000517251 106 ntBASIC3.96□□□□□ -1.78
MRE11P49959 SNRPGP16-201ENST00000533275 226 ntBASIC3.96□□□□□ -1.78
MRE11P49959 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.96□□□□□ -1.78
MRE11P49959 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.96□□□□□ -1.78
MRE11P49959 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.96□□□□□ -1.78
MRE11P49959 MIR5692A1-201ENST00000580523 69 ntBASIC3.96□□□□□ -1.78
MRE11P49959 ELOCP5-201ENST00000604924 333 ntBASIC3.96□□□□□ -1.78
MRE11P49959 XIST_intron.1-201ENST00000619444 68 ntBASIC3.96□□□□□ -1.78
MRE11P49959 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.96□□□□□ -1.78
MRE11P49959 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MRE11P49959 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MRE11P49959 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.96□□□□□ -1.78
MRE11P49959 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.95□□□□□ -1.78
MRE11P49959 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 Y_RNA.80-201ENST00000362996 102 ntBASIC3.95□□□□□ -1.78
MRE11P49959 Y_RNA.149-201ENST00000363558 117 ntBASIC3.95□□□□□ -1.78
MRE11P49959 Y_RNA.193-201ENST00000363979 102 ntBASIC3.95□□□□□ -1.78
MRE11P49959 MIR578-201ENST00000384828 96 ntBASIC3.95□□□□□ -1.78
MRE11P49959 RNA5SP129-201ENST00000410276 118 ntBASIC3.95□□□□□ -1.78
MRE11P49959 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 AC243428.1-201ENST00000421099 264 ntBASIC3.95□□□□□ -1.78
MRE11P49959 AC108059.2-201ENST00000434626 151 ntBASIC3.95□□□□□ -1.78
MRE11P49959 AC244505.4-201ENST00000434905 287 ntBASIC3.95□□□□□ -1.78
MRE11P49959 SSXP5-201ENST00000443473 287 ntBASIC3.95□□□□□ -1.78
MRE11P49959 AC128713.1-201ENST00000471495 306 ntBASIC3.95□□□□□ -1.78
MRE11P49959 AC015911.1-201ENST00000495111 156 ntBASIC3.95□□□□□ -1.78
MRE11P49959 AC022493.2-201ENST00000506122 481 ntBASIC3.95□□□□□ -1.78
MRE11P49959 MTND3P25-201ENST00000509243 135 ntBASIC3.95□□□□□ -1.78
MRE11P49959 RNU1-61P-201ENST00000516107 151 ntBASIC3.95□□□□□ -1.78
MRE11P49959 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.95□□□□□ -1.78
MRE11P49959 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 Z69720.2-201ENST00000624755 279 ntBASIC3.95□□□□□ -1.78
MRE11P49959 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.95□□□□□ -1.78
MRE11P49959 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
MRE11P49959 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MRE11P49959 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
MRE11P49959 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
MRE11P49959 AC017071.1-201ENST00000564407 2204 ntBASIC3.94□□□□□ -1.78
MRE11P49959 Y_RNA.2-201ENST00000362330 96 ntBASIC3.94□□□□□ -1.78
MRE11P49959 SNORA5B-201ENST00000363786 132 ntBASIC3.94□□□□□ -1.78
MRE11P49959 RNU6-1329P-201ENST00000365664 107 ntBASIC3.94□□□□□ -1.78
MRE11P49959 RNU6-505P-201ENST00000384427 107 ntBASIC3.94□□□□□ -1.78
MRE11P49959 MTCO1P39-201ENST00000426148 480 ntBASIC3.94□□□□□ -1.78
MRE11P49959 AC079780.1-201ENST00000428259 207 ntBASIC3.94□□□□□ -1.78
MRE11P49959 HMGN2P20-201ENST00000437531 273 ntBASIC3.94□□□□□ -1.78
MRE11P49959 RNU7-187P-201ENST00000458985 68 ntBASIC3.94□□□□□ -1.78
MRE11P49959 RN7SL75P-201ENST00000461926 281 ntBASIC3.94□□□□□ -1.78
MRE11P49959 AC008155.2-201ENST00000464337 397 ntBASIC3.94□□□□□ -1.78
MRE11P49959 VN1R104P-201ENST00000505115 1009 ntBASIC3.94□□□□□ -1.78
MRE11P49959 RNA5SP217-201ENST00000515959 91 ntBASIC3.94□□□□□ -1.78
MRE11P49959 RNU6-927P-201ENST00000516199 100 ntBASIC3.94□□□□□ -1.78
MRE11P49959 Y_RNA.676-201ENST00000516393 96 ntBASIC3.94□□□□□ -1.78
MRE11P49959 AC069113.1-201ENST00000517763 267 ntBASIC3.94□□□□□ -1.78
MRE11P49959 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
MRE11P49959 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.94□□□□□ -1.78
MRE11P49959 MIR548AC-201ENST00000585049 88 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms