Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 CYP4A27P-201ENST00000567218 190 ntBASIC5.04□□□□□ -1.6
CLK2P49760 AC004825.2-201ENST00000616634 455 ntBASIC5.04□□□□□ -1.6
CLK2P49760 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLK2P49760 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.04□□□□□ -1.6
CLK2P49760 MIR3199-2-201ENST00000636243 86 ntBASIC5.04□□□□□ -1.6
CLK2P49760 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLK2P49760 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.04□□□□□ -1.6
CLK2P49760 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.04□□□□□ -1.6
CLK2P49760 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLK2P49760 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.03□□□□□ -1.6
CLK2P49760 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 MAPK10-286ENST00000641208 8747 ntBASIC5.03□□□□□ -1.6
CLK2P49760 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.03□□□□□ -1.6
CLK2P49760 MIR331-201ENST00000362302 94 ntBASIC5.03□□□□□ -1.6
CLK2P49760 SNORA11F-201ENST00000408237 128 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.03□□□□□ -1.6
CLK2P49760 IFNA11P-201ENST00000446352 526 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AC091179.3-201ENST00000474761 144 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.03□□□□□ -1.6
CLK2P49760 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AL390726.5-202ENST00000564800 256 ntBASIC5.03□□□□□ -1.6
CLK2P49760 MIR4284-201ENST00000578924 81 ntBASIC5.03□□□□□ -1.6
CLK2P49760 MIR3136-201ENST00000583498 78 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AL160290.3-201ENST00000604869 165 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AC113403.1-201ENST00000604910 193 ntBASIC5.03□□□□□ -1.6
CLK2P49760 MIR378J-201ENST00000611988 109 ntBASIC5.03□□□□□ -1.6
CLK2P49760 uc_338.13-201ENST00000618243 179 ntBASIC5.03□□□□□ -1.6
CLK2P49760 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.03□□□□□ -1.6
CLK2P49760 AC068254.2-201ENST00000623938 3577 ntBASIC5.03□□□□□ -1.6
CLK2P49760 AP001642.1-201ENST00000624727 2117 ntBASIC5.03□□□□□ -1.6
CLK2P49760 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLK2P49760 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.03□□□□□ -1.6
CLK2P49760 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CLK2P49760 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.02□□□□□ -1.61
CLK2P49760 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLK2P49760 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
CLK2P49760 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLK2P49760 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLK2P49760 Y_RNA.272-201ENST00000364696 102 ntBASIC5.02□□□□□ -1.61
CLK2P49760 SNORD116-18-201ENST00000383961 92 ntBASIC5.02□□□□□ -1.61
CLK2P49760 MIR208B-201ENST00000401172 77 ntBASIC5.02□□□□□ -1.61
CLK2P49760 AC016397.1-201ENST00000412463 242 ntBASIC5.02□□□□□ -1.61
CLK2P49760 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.02□□□□□ -1.61
CLK2P49760 BTF3P11-201ENST00000426582 477 ntBASIC5.02□□□□□ -1.61
CLK2P49760 AC005300.1-201ENST00000428401 373 ntBASIC5.02□□□□□ -1.61
CLK2P49760 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.02□□□□□ -1.61
CLK2P49760 AC140059.1-201ENST00000489238 361 ntBASIC5.02□□□□□ -1.61
CLK2P49760 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.02□□□□□ -1.61
CLK2P49760 AL162713.1-201ENST00000604480 262 ntBASIC5.02□□□□□ -1.61
CLK2P49760 SNORD98-201ENST00000636377 67 ntBASIC5.02□□□□□ -1.61
CLK2P49760 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLK2P49760 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.02□□□□□ -1.61
CLK2P49760 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLK2P49760 CUL1P1-201ENST00000509510 2425 ntBASIC5.02□□□□□ -1.61
CLK2P49760 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLK2P49760 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLK2P49760 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLK2P49760 AC008079.2-201ENST00000623543 20396 ntBASIC5.01□□□□□ -1.61
CLK2P49760 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLK2P49760 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CLK2P49760 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLK2P49760 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.01□□□□□ -1.61
CLK2P49760 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLK2P49760 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLK2P49760 AC106871.1-201ENST00000568324 3102 ntBASIC5.01□□□□□ -1.61
CLK2P49760 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLK2P49760 RNU6-1272P-201ENST00000362776 107 ntBASIC5.01□□□□□ -1.61
CLK2P49760 RNU6-799P-201ENST00000363567 107 ntBASIC5.01□□□□□ -1.61
CLK2P49760 Y_RNA.571-201ENST00000384753 98 ntBASIC5.01□□□□□ -1.61
CLK2P49760 PTMAP5-201ENST00000393073 333 ntBASIC5.01□□□□□ -1.61
CLK2P49760 RNU5E-9P-201ENST00000411164 104 ntBASIC5.01□□□□□ -1.61
CLK2P49760 ELOCP21-201ENST00000412558 336 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.01□□□□□ -1.61
CLK2P49760 NDUFS5P3-201ENST00000450668 321 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AL645939.1-201ENST00000453429 797 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AC006445.2-201ENST00000510061 472 ntBASIC5.01□□□□□ -1.61
CLK2P49760 HMGB3P3-201ENST00000510526 400 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.01□□□□□ -1.61
CLK2P49760 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.01□□□□□ -1.61
CLK2P49760 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.01□□□□□ -1.61
CLK2P49760 ATP5J2P6-201ENST00000565203 266 ntBASIC5.01□□□□□ -1.61
CLK2P49760 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.01□□□□□ -1.61
CLK2P49760 AL133393.1-201ENST00000603277 287 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AC024220.1-201ENST00000603675 484 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AL110115.1-201ENST00000614396 364 ntBASIC5.01□□□□□ -1.61
CLK2P49760 AC007546.2-201ENST00000623996 360 ntBASIC5.01□□□□□ -1.61
CLK2P49760 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLK2P49760 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms