Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2□□□□□ -2.09
CASP4P49662 WISP1-OT1-201ENST00000602893 642 ntBASIC2□□□□□ -2.09
CASP4P49662 AL353778.1-201ENST00000603149 408 ntBASIC2□□□□□ -2.09
CASP4P49662 AL138889.2-201ENST00000603883 242 ntBASIC2□□□□□ -2.09
CASP4P49662 AC126118.1-201ENST00000607744 628 ntBASIC2□□□□□ -2.09
CASP4P49662 AC012360.2-201ENST00000609349 391 ntBASIC2□□□□□ -2.09
CASP4P49662 AL360219.1-201ENST00000610230 366 ntBASIC2□□□□□ -2.09
CASP4P49662 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CASP4P49662 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CASP4P49662 MTND4P4-201ENST00000439033 1366 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AL356292.1-201ENST00000283110 373 ntBASIC1.99□□□□□ -2.09
CASP4P49662 RNU6-641P-201ENST00000384006 107 ntBASIC1.99□□□□□ -2.09
CASP4P49662 RNU6-843P-201ENST00000384454 104 ntBASIC1.99□□□□□ -2.09
CASP4P49662 Y_RNA.560-201ENST00000384689 102 ntBASIC1.99□□□□□ -2.09
CASP4P49662 RPS3AP36-201ENST00000398190 775 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AL031577.2-201ENST00000404133 280 ntBASIC1.99□□□□□ -2.09
CASP4P49662 Y_RNA.598-201ENST00000410480 95 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.99□□□□□ -2.09
CASP4P49662 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.99□□□□□ -2.09
CASP4P49662 TAF9P1-201ENST00000445421 515 ntBASIC1.99□□□□□ -2.09
CASP4P49662 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.99□□□□□ -2.09
CASP4P49662 KATNBL1P6-201ENST00000453433 915 ntBASIC1.99□□□□□ -2.09
CASP4P49662 TAF9P2-201ENST00000454958 515 ntBASIC1.99□□□□□ -2.09
CASP4P49662 snoU13.15-201ENST00000459407 104 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.99□□□□□ -2.09
CASP4P49662 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.99□□□□□ -2.09
CASP4P49662 AC112206.3-201ENST00000514578 389 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AC109329.1-201ENST00000518744 317 ntBASIC1.99□□□□□ -2.09
CASP4P49662 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.99□□□□□ -2.09
CASP4P49662 AK6P1-201ENST00000540219 478 ntBASIC1.99□□□□□ -2.09
CASP4P49662 BNIP3P30-201ENST00000601184 574 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AC073410.2-201ENST00000603240 332 ntBASIC1.99□□□□□ -2.09
CASP4P49662 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CASP4P49662 AC122133.1-201ENST00000613964 233 ntBASIC1.99□□□□□ -2.09
CASP4P49662 SCARNA4-202ENST00000625402 129 ntBASIC1.99□□□□□ -2.09
CASP4P49662 AP006437.1-201ENST00000641440 3685 ntBASIC1.99□□□□□ -2.09
CASP4P49662 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CASP4P49662 RNU6-1010P-201ENST00000362757 107 ntBASIC1.98□□□□□ -2.09
CASP4P49662 RNU6-72P-201ENST00000384285 79 ntBASIC1.98□□□□□ -2.09
CASP4P49662 RNU1-57P-201ENST00000384491 166 ntBASIC1.98□□□□□ -2.09
CASP4P49662 MIR561-201ENST00000385216 97 ntBASIC1.98□□□□□ -2.09
CASP4P49662 CISD1P1-201ENST00000393907 327 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
CASP4P49662 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
CASP4P49662 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.98□□□□□ -2.09
CASP4P49662 AC010095.1-201ENST00000443543 144 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
CASP4P49662 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.98□□□□□ -2.09
CASP4P49662 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.98□□□□□ -2.09
CASP4P49662 RNU6-123P-201ENST00000516163 102 ntBASIC1.98□□□□□ -2.09
CASP4P49662 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.98□□□□□ -2.09
CASP4P49662 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.98□□□□□ -2.09
CASP4P49662 MTATP6P24-201ENST00000576835 677 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AC009977.1-201ENST00000586015 570 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AC012065.4-201ENST00000602445 679 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AL713866.2-201ENST00000603579 219 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AC093788.1-201ENST00000609356 927 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
CASP4P49662 AF246928.1-201ENST00000623768 87 ntBASIC1.98□□□□□ -2.09
CASP4P49662 RBBP8P1-201ENST00000449447 1844 ntBASIC1.98□□□□□ -2.09
CASP4P49662 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CASP4P49662 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CASP4P49662 SNORD14B-201ENST00000364533 90 ntBASIC1.97□□□□□ -2.09
CASP4P49662 MIR10A-201ENST00000385043 110 ntBASIC1.97□□□□□ -2.09
CASP4P49662 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
CASP4P49662 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
CASP4P49662 RNU6-387P-201ENST00000411331 105 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AL365203.2-201ENST00000423444 196 ntBASIC1.97□□□□□ -2.09
CASP4P49662 TOMM20P4-201ENST00000427861 435 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.97□□□□□ -2.09
CASP4P49662 AL365400.1-201ENST00000431854 640 ntBASIC1.97□□□□□ -2.09
CASP4P49662 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
CASP4P49662 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.97□□□□□ -2.09
CASP4P49662 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.97□□□□□ -2.09
CASP4P49662 AC022616.3-201ENST00000523940 148 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.97□□□□□ -2.09
CASP4P49662 AP000873.5-201ENST00000533906 236 ntBASIC1.97□□□□□ -2.09
CASP4P49662 OR11H5P-201ENST00000554039 926 ntBASIC1.97□□□□□ -2.09
CASP4P49662 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AC021646.1-201ENST00000605469 484 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AC091304.9-201ENST00000612091 226 ntBASIC1.97□□□□□ -2.09
CASP4P49662 MIR6845-201ENST00000613182 61 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.97□□□□□ -2.09
CASP4P49662 AC108479.2-201ENST00000617314 601 ntBASIC1.97□□□□□ -2.09
CASP4P49662 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.97□□□□□ -2.09
CASP4P49662 OR4G2P-201ENST00000328113 903 ntBASIC1.96□□□□□ -2.1
CASP4P49662 MIR1294-201ENST00000408503 142 ntBASIC1.96□□□□□ -2.1
CASP4P49662 EDDM3CP-201ENST00000415977 425 ntBASIC1.96□□□□□ -2.1
CASP4P49662 AC114491.1-201ENST00000416095 246 ntBASIC1.96□□□□□ -2.1
CASP4P49662 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.96□□□□□ -2.1
CASP4P49662 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CASP4P49662 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
CASP4P49662 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
CASP4P49662 RNU6-759P-201ENST00000516740 103 ntBASIC1.96□□□□□ -2.1
CASP4P49662 RNA5SP137-201ENST00000516833 135 ntBASIC1.96□□□□□ -2.1
CASP4P49662 SNORA31.25-201ENST00000517242 134 ntBASIC1.96□□□□□ -2.1
CASP4P49662 CR383656.8-201ENST00000549046 145 ntBASIC1.96□□□□□ -2.1
CASP4P49662 AC025678.1-201ENST00000567861 338 ntBASIC1.96□□□□□ -2.1
CASP4P49662 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms