Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SNORD14B-201ENST00000364533 90 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AC007283.2-201ENST00000424739 197 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AL365184.2-201ENST00000431139 435 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AC119618.1-201ENST00000434191 222 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AL353689.1-201ENST00000438895 199 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 DNAJC19P4-201ENST00000440115 345 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 MTND6P13-201ENST00000443510 523 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AL590365.1-201ENST00000450788 243 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 RPL23AP42-201ENST00000471152 471 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AC010587.1-201ENST00000505809 469 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC1A1P43005 RNU1-41P-201ENST00000516161 162 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 RNU1-48P-201ENST00000516400 162 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 RNU6-667P-201ENST00000517186 102 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AP005435.4-201ENST00000529514 284 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.74□□□□□ -2.13
SLC1A1P43005 AC026271.5-201ENST00000577873 130 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 MIR548AC-201ENST00000585049 88 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 uc_338.15-201ENST00000615470 191 ntBASIC1.74□□□□□ -2.13
SLC1A1P43005 RNU5E-1-201ENST00000362477 120 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 RNU6-487P-201ENST00000365430 104 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 RNU6-39P-201ENST00000384344 107 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 CISD1P1-201ENST00000393907 327 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC114491.1-201ENST00000416095 246 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC1A1P43005 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.73□□□□□ -2.13
SLC1A1P43005 CALM1P1-201ENST00000442082 433 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 NDUFB1P2-201ENST00000449477 176 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AL137159.1-201ENST00000452808 512 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC104564.1-201ENST00000493028 407 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC1A1P43005 RNU6-123P-201ENST00000516163 102 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC109329.1-201ENST00000518744 317 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 ELOCP32-201ENST00000548625 324 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 CR383656.8-201ENST00000549046 145 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 ADI1P3-201ENST00000549509 470 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 MIR4299-201ENST00000577899 72 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 MIR5697-201ENST00000578045 78 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC245884.10-201ENST00000597355 337 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 BNIP3P39-201ENST00000601077 554 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AL138889.2-201ENST00000603883 242 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC005034.5-201ENST00000604219 466 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AL359999.1-201ENST00000604513 294 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AL031775.1-201ENST00000607014 887 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 AC012409.4-201ENST00000612923 249 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC1A1P43005 AC090517.3-201ENST00000625170 141 ntBASIC1.73□□□□□ -2.13
SLC1A1P43005 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SLC1A1P43005 HAUS6P2-201ENST00000433254 2404 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 RNU6-622P-201ENST00000384272 103 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SLC1A1P43005 Y_RNA.608-201ENST00000410647 95 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC137499.1-201ENST00000427602 88 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC1A1P43005 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 MTCYBP39-201ENST00000437562 491 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 BZW1P2-201ENST00000473537 826 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC108078.2-201ENST00000510750 236 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AC091965.2-201ENST00000512324 613 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.72□□□□□ -2.13
SLC1A1P43005 CYCSP27-201ENST00000527643 293 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AP003461.1-201ENST00000528866 78 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.72□□□□□ -2.13
SLC1A1P43005 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC1A1P43005 SNRPGP17-201ENST00000603780 214 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 RNU6-87P-201ENST00000607561 108 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AP000240.1-201ENST00000609910 452 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AC068944.2-201ENST00000610373 403 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AC092140.2-201ENST00000618027 521 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 U6.42-201ENST00000618440 107 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC006927.3-201ENST00000638789 384 ntBASIC1.72□□□□□ -2.13
SLC1A1P43005 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SLC1A1P43005 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.71□□□□□ -2.14
SLC1A1P43005 RNU4-42P-201ENST00000364738 142 ntBASIC1.71□□□□□ -2.14
SLC1A1P43005 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
SLC1A1P43005 SNORD116-20-201ENST00000384529 92 ntBASIC1.71□□□□□ -2.14
SLC1A1P43005 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms