Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.01□□□□□ -2.41
HTTP42858 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.01□□□□□ -2.41
HTTP42858 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC-0.01□□□□□ -2.41
HTTP42858 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.01□□□□□ -2.41
HTTP42858 AC090079.2-201ENST00000575289 768 ntBASIC-0.01□□□□□ -2.41
HTTP42858 MIR378F-201ENST00000578143 78 ntBASIC-0.01□□□□□ -2.41
HTTP42858 SNRPGP20-201ENST00000604477 205 ntBASIC-0.01□□□□□ -2.41
HTTP42858 AC008498.1-201ENST00000613012 531 ntBASIC-0.01□□□□□ -2.41
HTTP42858 MIR6134-201ENST00000617606 109 ntBASIC-0.01□□□□□ -2.41
HTTP42858 RNU6-837P-201ENST00000391056 108 ntBASIC-0.02□□□□□ -2.41
HTTP42858 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.02□□□□□ -2.41
HTTP42858 AC092423.1-201ENST00000430165 186 ntBASIC-0.02□□□□□ -2.41
HTTP42858 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.02□□□□□ -2.41
HTTP42858 SNORA31.22-201ENST00000517204 135 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.02□□□□□ -2.41
HTTP42858 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.02□□□□□ -2.41
HTTP42858 MTCYBP22-201ENST00000603788 447 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC024257.5-201ENST00000612739 531 ntBASIC-0.02□□□□□ -2.41
HTTP42858 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.02□□□□□ -2.41
HTTP42858 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
HTTP42858 SNORA25.3-201ENST00000363205 127 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.02□□□□□ -2.41
HTTP42858 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.02□□□□□ -2.41
HTTP42858 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.02□□□□□ -2.41
HTTP42858 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.02□□□□□ -2.41
HTTP42858 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.02□□□□□ -2.41
HTTP42858 AC025465.3-201ENST00000510570 311 ntBASIC-0.02□□□□□ -2.41
HTTP42858 SCARNA8-201ENST00000515924 131 ntBASIC-0.02□□□□□ -2.41
HTTP42858 SNORD116-28-201ENST00000516123 91 ntBASIC-0.02□□□□□ -2.41
HTTP42858 RNA5SP255-201ENST00000516370 107 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC-0.02□□□□□ -2.41
HTTP42858 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.02□□□□□ -2.41
HTTP42858 CYP3A52P-201ENST00000563326 91 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.02□□□□□ -2.41
HTTP42858 AC069114.2-201ENST00000604699 304 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.02□□□□□ -2.41
HTTP42858 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AL049641.1-201ENST00000441055 1948 ntBASIC-0.02□□□□□ -2.41
HTTP42858 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
HTTP42858 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
HTTP42858 RNU2-49P-201ENST00000410666 184 ntBASIC-0.02□□□□□ -2.41
HTTP42858 USP9YP26-201ENST00000421008 661 ntBASIC-0.02□□□□□ -2.41
HTTP42858 EIF1P1-201ENST00000421436 341 ntBASIC-0.02□□□□□ -2.41
HTTP42858 USP9YP18-201ENST00000425912 695 ntBASIC-0.02□□□□□ -2.41
HTTP42858 USP9YP24-201ENST00000434374 697 ntBASIC-0.02□□□□□ -2.41
HTTP42858 FGF7P5-201ENST00000441829 291 ntBASIC-0.02□□□□□ -2.41
HTTP42858 USP9YP17-201ENST00000444617 696 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC087897.1-201ENST00000550134 156 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC022523.2-201ENST00000561045 150 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC010900.2-201ENST00000604508 210 ntBASIC-0.02□□□□□ -2.41
HTTP42858 AC090517.2-201ENST00000614966 680 ntBASIC-0.02□□□□□ -2.41
HTTP42858 LINC02555-201ENST00000563933 1951 ntBASIC-0.03□□□□□ -2.41
HTTP42858 SNORD115-41-201ENST00000363608 82 ntBASIC-0.03□□□□□ -2.41
HTTP42858 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.03□□□□□ -2.41
HTTP42858 RPS26P42-201ENST00000413485 326 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.03□□□□□ -2.41
HTTP42858 AL449283.1-202ENST00000418249 604 ntBASIC-0.03□□□□□ -2.41
HTTP42858 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.03□□□□□ -2.41
HTTP42858 AC132479.1-201ENST00000449160 144 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.03□□□□□ -2.41
HTTP42858 AC084024.2-201ENST00000503480 791 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AC074344.1-201ENST00000512823 224 ntBASIC-0.03□□□□□ -2.41
HTTP42858 RNU6-782P-201ENST00000516852 104 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.03□□□□□ -2.41
HTTP42858 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.03□□□□□ -2.41
HTTP42858 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AC080013.4-201ENST00000607624 649 ntBASIC-0.03□□□□□ -2.41
HTTP42858 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
HTTP42858 SNORD33-201ENST00000362761 85 ntBASIC-0.03□□□□□ -2.41
HTTP42858 SNORD114-28-201ENST00000363610 72 ntBASIC-0.03□□□□□ -2.41
HTTP42858 MIR218-1-201ENST00000384999 110 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AC078974.1-201ENST00000411597 223 ntBASIC-0.03□□□□□ -2.41
HTTP42858 ISCA1P1-201ENST00000426679 387 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AC008562.1-201ENST00000521763 330 ntBASIC-0.03□□□□□ -2.41
HTTP42858 RAB11AP2-201ENST00000545905 639 ntBASIC-0.03□□□□□ -2.41
HTTP42858 CYB5AP5-201ENST00000549779 389 ntBASIC-0.03□□□□□ -2.41
HTTP42858 AC008088.1-201ENST00000580993 280 ntBASIC-0.03□□□□□ -2.41
HTTP42858 U1.36-201ENST00000620684 176 ntBASIC-0.03□□□□□ -2.41
HTTP42858 MIR1302-8-201ENST00000408342 128 ntBASIC-0.04□□□□□ -2.42
HTTP42858 ELOCP11-201ENST00000436690 332 ntBASIC-0.04□□□□□ -2.42
HTTP42858 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.04□□□□□ -2.42
HTTP42858 ELOCP16-201ENST00000444494 332 ntBASIC-0.04□□□□□ -2.42
HTTP42858 RAP1BP2-201ENST00000478270 544 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AC136619.2-201ENST00000563361 631 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AC092354.1-201ENST00000606057 376 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AC110792.4-201ENST00000609843 298 ntBASIC-0.04□□□□□ -2.42
HTTP42858 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
HTTP42858 AC009950.2-201ENST00000636548 183 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AL359854.1-201ENST00000614203 1594 ntBASIC-0.04□□□□□ -2.42
HTTP42858 OR5T3-201ENST00000303059 1023 ntBASIC-0.04□□□□□ -2.42
HTTP42858 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.04□□□□□ -2.42
HTTP42858 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.04□□□□□ -2.42
HTTP42858 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 AC112492.4-201ENST00000456549 352 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AC108740.1-201ENST00000498629 225 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AC105758.1-201ENST00000506038 399 ntBASIC-0.04□□□□□ -2.42
HTTP42858 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 IGJP1-201ENST00000522682 475 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms