Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AF228730.1-201ENST00000397972 663 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN6P29350 EEF1A1P40-201ENST00000412883 573 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.18□□□□□ -2.06
PTPN6P29350 MTCO3P5-201ENST00000433620 714 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AL360271.2-201ENST00000447710 161 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.18□□□□□ -2.06
PTPN6P29350 AC068781.1-201ENST00000488231 618 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.18□□□□□ -2.06
PTPN6P29350 AC091965.2-201ENST00000512324 613 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.18□□□□□ -2.06
PTPN6P29350 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.18□□□□□ -2.06
PTPN6P29350 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.18□□□□□ -2.06
PTPN6P29350 AC021269.2-201ENST00000532318 330 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 CBX3P7-201ENST00000532876 502 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 SNORD53-201ENST00000579969 78 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AC104984.5-201ENST00000586878 94 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 BNIP3P30-201ENST00000601184 574 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 Z99497.2-201ENST00000603634 310 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 Z84480.1-201ENST00000605131 311 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.18□□□□□ -2.06
PTPN6P29350 SCARNA4-202ENST00000625402 129 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
PTPN6P29350 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
PTPN6P29350 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PTPN6P29350 AC006020.1-201ENST00000420179 1854 ntBASIC2.18□□□□□ -2.06
PTPN6P29350 RBBP8P1-201ENST00000449447 1844 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RNU6-1287P-201ENST00000362914 107 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RNU6-371P-201ENST00000364283 108 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RNU1-91P-201ENST00000364746 163 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RNU6-108P-201ENST00000365558 107 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 SNORD116-8-201ENST00000384365 95 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RNU1-148P-201ENST00000384472 162 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RNU6-1060P-201ENST00000384664 107 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 MIR1261-201ENST00000408659 82 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 RN7SKP142-201ENST00000411236 328 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.17□□□□□ -2.06
PTPN6P29350 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.17□□□□□ -2.06
PTPN6P29350 OR6C66P-201ENST00000414917 930 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 PGBD4P6-201ENST00000421501 610 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PTPN6P29350 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.17□□□□□ -2.06
PTPN6P29350 CALM1P1-201ENST00000442082 433 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 AC244505.5-201ENST00000443639 207 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.17□□□□□ -2.06
PTPN6P29350 RPL7P43-201ENST00000478876 753 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 AP003072.2-201ENST00000527756 676 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.17□□□□□ -2.06
PTPN6P29350 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.17□□□□□ -2.06
PTPN6P29350 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 AC087241.4-201ENST00000612441 480 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 MIR6715A-201ENST00000615929 79 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
PTPN6P29350 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
PTPN6P29350 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.17□□□□□ -2.06
PTPN6P29350 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.17□□□□□ -2.06
PTPN6P29350 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PTPN6P29350 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTPN6P29350 RNU6-942P-201ENST00000363002 107 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 RNU6-843P-201ENST00000384454 104 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.16□□□□□ -2.06
PTPN6P29350 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN6P29350 AL365400.1-201ENST00000431854 640 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.16□□□□□ -2.06
PTPN6P29350 MTND1P26-201ENST00000440488 538 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 KATNBL1P3-201ENST00000443475 909 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AL513124.1-201ENST00000450410 614 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN6P29350 AC006026.2-201ENST00000457376 180 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.16□□□□□ -2.06
PTPN6P29350 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.16□□□□□ -2.06
PTPN6P29350 Y_RNA.687-201ENST00000516558 91 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
PTPN6P29350 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.16□□□□□ -2.06
PTPN6P29350 PSMA3P-201ENST00000555485 635 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 MTCYBP33-201ENST00000575007 1130 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 MIR3126-201ENST00000577443 74 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN6P29350 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN6P29350 AC040904.1-201ENST00000590850 223 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC021646.1-201ENST00000605469 484 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC006566.1-201ENST00000608943 513 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC093788.1-201ENST00000609356 927 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 AC009233.1-201ENST00000616477 371 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.16□□□□□ -2.06
PTPN6P29350 SEPT14P19-203ENST00000633205 211 ntBASIC2.16□□□□□ -2.06
PTPN6P29350 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTPN6P29350 OR4G2P-201ENST00000328113 903 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 RNU6-384P-201ENST00000364900 104 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 RNU6-74P-201ENST00000384235 107 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 RNU6-456P-201ENST00000384493 107 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 SNORD116-20-201ENST00000384529 92 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 MIR1-2-201ENST00000384961 85 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 MIR454-201ENST00000390180 115 ntBASIC2.15□□□□□ -2.07
PTPN6P29350 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms