Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.72□□□□□ -1.97
BDNFP23560 MTND3P25-201ENST00000509243 135 ntBASIC2.72□□□□□ -1.97
BDNFP23560 SNORA4.4-201ENST00000515921 135 ntBASIC2.72□□□□□ -1.97
BDNFP23560 SNORA31.25-201ENST00000517242 134 ntBASIC2.72□□□□□ -1.97
BDNFP23560 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
BDNFP23560 AC060788.1-201ENST00000521318 469 ntBASIC2.72□□□□□ -1.97
BDNFP23560 AP001893.2-201ENST00000526949 202 ntBASIC2.72□□□□□ -1.97
BDNFP23560 NDUFA5P6-201ENST00000542110 379 ntBASIC2.72□□□□□ -1.97
BDNFP23560 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.72□□□□□ -1.97
BDNFP23560 AC008088.1-201ENST00000580993 280 ntBASIC2.72□□□□□ -1.97
BDNFP23560 MIR4775-201ENST00000581168 75 ntBASIC2.72□□□□□ -1.97
BDNFP23560 ELOCP5-201ENST00000604924 333 ntBASIC2.72□□□□□ -1.97
BDNFP23560 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
BDNFP23560 AC078883.4-201ENST00000623218 367 ntBASIC2.72□□□□□ -1.97
BDNFP23560 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
BDNFP23560 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
BDNFP23560 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
BDNFP23560 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
BDNFP23560 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
BDNFP23560 Y_RNA.480-201ENST00000384364 102 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.71□□□□□ -1.98
BDNFP23560 MTND1P18-201ENST00000448191 573 ntBASIC2.71□□□□□ -1.98
BDNFP23560 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.71□□□□□ -1.98
BDNFP23560 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.71□□□□□ -1.98
BDNFP23560 MTCYBP1-201ENST00000454315 1119 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AC098862.1-201ENST00000504991 413 ntBASIC2.71□□□□□ -1.98
BDNFP23560 MTND2P33-201ENST00000506452 1031 ntBASIC2.71□□□□□ -1.98
BDNFP23560 RNU2-19P-201ENST00000517288 84 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AC109479.2-201ENST00000517842 174 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AC115990.1-201ENST00000526957 301 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.71□□□□□ -1.98
BDNFP23560 MIR3913-1-201ENST00000577744 102 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AL136363.2-201ENST00000604173 851 ntBASIC2.71□□□□□ -1.98
BDNFP23560 AC009161.2-201ENST00000624626 138 ntBASIC2.71□□□□□ -1.98
BDNFP23560 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.71□□□□□ -1.98
BDNFP23560 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
BDNFP23560 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BDNFP23560 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
BDNFP23560 RNU6-297P-201ENST00000384636 107 ntBASIC2.7□□□□□ -1.98
BDNFP23560 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BDNFP23560 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.7□□□□□ -1.98
BDNFP23560 AC244505.5-201ENST00000443639 207 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BDNFP23560 MTCO2P6-201ENST00000463134 685 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.7□□□□□ -1.98
BDNFP23560 RNA5SP320-201ENST00000516263 124 ntBASIC2.7□□□□□ -1.98
BDNFP23560 RNU6-1178P-201ENST00000516674 107 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.7□□□□□ -1.98
BDNFP23560 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.7□□□□□ -1.98
BDNFP23560 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.7□□□□□ -1.98
BDNFP23560 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.7□□□□□ -1.98
BDNFP23560 AP002963.1-201ENST00000530590 184 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AP000763.2-201ENST00000540641 163 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.7□□□□□ -1.98
BDNFP23560 AC073539.2-201ENST00000597113 165 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AC121247.2-201ENST00000604776 136 ntBASIC2.7□□□□□ -1.98
BDNFP23560 AC120349.3-201ENST00000624377 529 ntBASIC2.7□□□□□ -1.98
BDNFP23560 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
BDNFP23560 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BDNFP23560 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BDNFP23560 RNU6-1029P-201ENST00000384109 107 ntBASIC2.69□□□□□ -1.98
BDNFP23560 RNU6-606P-201ENST00000384721 111 ntBASIC2.69□□□□□ -1.98
BDNFP23560 MIR27B-201ENST00000385129 97 ntBASIC2.69□□□□□ -1.98
BDNFP23560 SNORA11.2-201ENST00000408318 127 ntBASIC2.69□□□□□ -1.98
BDNFP23560 RNU6-1140P-201ENST00000410517 106 ntBASIC2.69□□□□□ -1.98
BDNFP23560 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.69□□□□□ -1.98
BDNFP23560 BX295541.1-201ENST00000417774 250 ntBASIC2.69□□□□□ -1.98
BDNFP23560 USP9YP18-201ENST00000425912 695 ntBASIC2.69□□□□□ -1.98
BDNFP23560 AC079448.1-201ENST00000449377 373 ntBASIC2.69□□□□□ -1.98
BDNFP23560 AL137159.1-201ENST00000452808 512 ntBASIC2.69□□□□□ -1.98
BDNFP23560 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.69□□□□□ -1.98
BDNFP23560 AC055731.1-201ENST00000474387 401 ntBASIC2.69□□□□□ -1.98
BDNFP23560 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
BDNFP23560 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.69□□□□□ -1.98
BDNFP23560 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BDNFP23560 MTCYBP40-201ENST00000509390 1135 ntBASIC2.69□□□□□ -1.98
BDNFP23560 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.69□□□□□ -1.98
BDNFP23560 MTCO3P28-201ENST00000513351 515 ntBASIC2.69□□□□□ -1.98
BDNFP23560 AC010493.1-201ENST00000513479 292 ntBASIC2.69□□□□□ -1.98
BDNFP23560 AL031601.2-202ENST00000622650 282 ntBASIC2.69□□□□□ -1.98
BDNFP23560 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BDNFP23560 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
BDNFP23560 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
BDNFP23560 RNU6-546P-201ENST00000383991 107 ntBASIC2.68□□□□□ -1.98
BDNFP23560 RNU6-1032P-201ENST00000384100 107 ntBASIC2.68□□□□□ -1.98
BDNFP23560 RNU6-434P-201ENST00000384376 107 ntBASIC2.68□□□□□ -1.98
BDNFP23560 MIR1-2-201ENST00000384961 85 ntBASIC2.68□□□□□ -1.98
BDNFP23560 MIR29C-201ENST00000385231 88 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AC009963.1-201ENST00000417265 157 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AC000111.3-201ENST00000433478 193 ntBASIC2.68□□□□□ -1.98
BDNFP23560 DNAJC19P4-201ENST00000440115 345 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.68□□□□□ -1.98
BDNFP23560 GPM6BP3-201ENST00000442797 145 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AL513328.1-201ENST00000446460 224 ntBASIC2.68□□□□□ -1.98
BDNFP23560 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.68□□□□□ -1.98
BDNFP23560 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.68□□□□□ -1.98
BDNFP23560 MTCO3P9-201ENST00000506989 781 ntBASIC2.68□□□□□ -1.98
BDNFP23560 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.68□□□□□ -1.98
BDNFP23560 RN7SKP24-201ENST00000515888 284 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms