Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR3974-201ENST00000637126 96 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 MIR3529-201ENST00000637713 78 ntBASIC2.13□□□□□ -2.07
XRCC1P18887 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.13□□□□□ -2.07
XRCC1P18887 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
XRCC1P18887 HAUS6P2-201ENST00000433254 2404 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
XRCC1P18887 Y_RNA.201-201ENST00000364052 96 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 RNU6-371P-201ENST00000364283 108 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 SNORD14B-201ENST00000364533 90 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 SNORD115-7-201ENST00000365306 82 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 RNU6-1179P-201ENST00000384667 107 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 Y_RNA.576-201ENST00000384781 102 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 MIR454-201ENST00000390180 115 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 CIR1P3-201ENST00000405137 479 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AL355497.1-201ENST00000406262 551 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 FTH1P15-201ENST00000406984 280 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.12□□□□□ -2.07
XRCC1P18887 AC090960.1-201ENST00000421072 306 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 MTATP6P17-201ENST00000431030 672 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 RPL31P35-201ENST00000431058 377 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 MTCO3P5-201ENST00000433620 714 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.12□□□□□ -2.07
XRCC1P18887 AC244505.5-201ENST00000443639 207 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.12□□□□□ -2.07
XRCC1P18887 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.12□□□□□ -2.07
XRCC1P18887 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.12□□□□□ -2.07
XRCC1P18887 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.12□□□□□ -2.07
XRCC1P18887 MIR892C-201ENST00000516410 77 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AP004607.1-201ENST00000524456 203 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.12□□□□□ -2.07
XRCC1P18887 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.12□□□□□ -2.07
XRCC1P18887 DEFB131E-202ENST00000602581 683 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AC087752.4-201ENST00000605911 462 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AC006566.1-201ENST00000608943 513 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.12□□□□□ -2.07
XRCC1P18887 uc_338.11-201ENST00000619132 160 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
XRCC1P18887 SCARNA4-202ENST00000625402 129 ntBASIC2.12□□□□□ -2.07
XRCC1P18887 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
XRCC1P18887 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.12□□□□□ -2.07
XRCC1P18887 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.12□□□□□ -2.07
XRCC1P18887 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
XRCC1P18887 OR56A5-201ENST00000340110 738 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 Y_RNA.367-201ENST00000365544 101 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 RNU6-74P-201ENST00000384235 107 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 RNU6-72P-201ENST00000384285 79 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 MIR578-201ENST00000384828 96 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 MIR10A-201ENST00000385043 110 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 RN7SKP142-201ENST00000411236 328 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.11□□□□□ -2.07
XRCC1P18887 AC016831.2-201ENST00000417179 352 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC003685.2-201ENST00000422795 395 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC133104.1-201ENST00000429100 218 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.11□□□□□ -2.07
XRCC1P18887 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.11□□□□□ -2.07
XRCC1P18887 AC104058.1-201ENST00000448028 297 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC012308.1-201ENST00000451232 178 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 MTCYBP1-201ENST00000454315 1119 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 RNU7-182P-201ENST00000459009 62 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 snoU13.15-201ENST00000459407 104 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 YWHAEP4-201ENST00000505390 198 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC104806.1-201ENST00000508720 308 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.11□□□□□ -2.07
XRCC1P18887 AC010486.3-201ENST00000511602 785 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC091965.2-201ENST00000512324 613 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 SNORD27.1-201ENST00000516319 72 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 HSPE1P18-201ENST00000517602 280 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 CR383656.8-201ENST00000549046 145 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.11□□□□□ -2.07
XRCC1P18887 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.11□□□□□ -2.07
XRCC1P18887 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.11□□□□□ -2.07
XRCC1P18887 AC068790.2-201ENST00000602601 557 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AL158063.1-201ENST00000615349 536 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC009090.3-201ENST00000616553 565 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC010378.1-201ENST00000619270 362 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.11□□□□□ -2.07
XRCC1P18887 SEPT14P19-203ENST00000633205 211 ntBASIC2.11□□□□□ -2.07
XRCC1P18887 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
XRCC1P18887 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
XRCC1P18887 RNU6-858P-201ENST00000362436 107 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 RNU6-487P-201ENST00000365430 104 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 RNU6-843P-201ENST00000384454 104 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 RAP1BP3-201ENST00000407180 549 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 EEF1A1P40-201ENST00000412883 573 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 OR6C66P-201ENST00000414917 930 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 BX295541.1-201ENST00000417774 250 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.1□□□□□ -2.07
XRCC1P18887 TOMM20P4-201ENST00000427861 435 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 KATNBL1P3-201ENST00000443475 909 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 RPL7P12-201ENST00000446719 750 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.1□□□□□ -2.07
XRCC1P18887 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.1□□□□□ -2.07
XRCC1P18887 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
XRCC1P18887 MED28P2-201ENST00000475771 317 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms