Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FABP5P15-201ENST00000453566 214 ntBASIC2□□□□□ -2.09
RETP07949 AL033528.1-201ENST00000453780 140 ntBASIC2□□□□□ -2.09
RETP07949 MTND1P12-201ENST00000455231 147 ntBASIC2□□□□□ -2.09
RETP07949 RPL31P3-201ENST00000458430 332 ntBASIC2□□□□□ -2.09
RETP07949 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2□□□□□ -2.09
RETP07949 MTND1P3-201ENST00000484956 952 ntBASIC2□□□□□ -2.09
RETP07949 AC010587.1-201ENST00000505809 469 ntBASIC2□□□□□ -2.09
RETP07949 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2□□□□□ -2.09
RETP07949 Y_RNA.672-201ENST00000516289 104 ntBASIC2□□□□□ -2.09
RETP07949 Y_RNA.695-201ENST00000516715 107 ntBASIC2□□□□□ -2.09
RETP07949 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2□□□□□ -2.09
RETP07949 MIR4287-201ENST00000579398 78 ntBASIC2□□□□□ -2.09
RETP07949 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2□□□□□ -2.09
RETP07949 AC005771.1-201ENST00000585581 349 ntBASIC2□□□□□ -2.09
RETP07949 AC008121.1-201ENST00000603244 268 ntBASIC2□□□□□ -2.09
RETP07949 AC009314.1-201ENST00000603871 304 ntBASIC2□□□□□ -2.09
RETP07949 AC010678.1-201ENST00000614118 713 ntBASIC2□□□□□ -2.09
RETP07949 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
RETP07949 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RETP07949 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
RETP07949 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2□□□□□ -2.09
RETP07949 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RETP07949 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RETP07949 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
RETP07949 SNORD116-1-201ENST00000384335 95 ntBASIC1.99□□□□□ -2.09
RETP07949 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
RETP07949 SNORA40.3-201ENST00000390964 122 ntBASIC1.99□□□□□ -2.09
RETP07949 RNU2-8P-201ENST00000410727 190 ntBASIC1.99□□□□□ -2.09
RETP07949 RPS3AP3-201ENST00000411933 242 ntBASIC1.99□□□□□ -2.09
RETP07949 AL589872.1-201ENST00000426602 288 ntBASIC1.99□□□□□ -2.09
RETP07949 HMGB1P9-201ENST00000429856 646 ntBASIC1.99□□□□□ -2.09
RETP07949 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.99□□□□□ -2.09
RETP07949 MTND6P13-201ENST00000443510 523 ntBASIC1.99□□□□□ -2.09
RETP07949 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RETP07949 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.99□□□□□ -2.09
RETP07949 snoU109.1-201ENST00000459339 135 ntBASIC1.99□□□□□ -2.09
RETP07949 AC093534.1-201ENST00000504977 132 ntBASIC1.99□□□□□ -2.09
RETP07949 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.99□□□□□ -2.09
RETP07949 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.99□□□□□ -2.09
RETP07949 AC117532.1-201ENST00000514638 323 ntBASIC1.99□□□□□ -2.09
RETP07949 AC022447.1-201ENST00000515358 464 ntBASIC1.99□□□□□ -2.09
RETP07949 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.99□□□□□ -2.09
RETP07949 SNORA31.3-201ENST00000516029 96 ntBASIC1.99□□□□□ -2.09
RETP07949 RNU6-581P-201ENST00000516214 105 ntBASIC1.99□□□□□ -2.09
RETP07949 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.99□□□□□ -2.09
RETP07949 AC011979.2-201ENST00000527568 352 ntBASIC1.99□□□□□ -2.09
RETP07949 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.99□□□□□ -2.09
RETP07949 SUB1P3-201ENST00000564581 315 ntBASIC1.99□□□□□ -2.09
RETP07949 MIR3683-201ENST00000580847 82 ntBASIC1.99□□□□□ -2.09
RETP07949 PIGPP4-201ENST00000584447 307 ntBASIC1.99□□□□□ -2.09
RETP07949 AL391813.1-201ENST00000603098 260 ntBASIC1.99□□□□□ -2.09
RETP07949 AC097065.2-201ENST00000608159 533 ntBASIC1.99□□□□□ -2.09
RETP07949 AC008250.2-201ENST00000615261 205 ntBASIC1.99□□□□□ -2.09
RETP07949 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
RETP07949 AC103710.2-202ENST00000641454 2853 ntBASIC1.98□□□□□ -2.09
RETP07949 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
RETP07949 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.98□□□□□ -2.09
RETP07949 RNU6-511P-201ENST00000363496 107 ntBASIC1.98□□□□□ -2.09
RETP07949 RNU4-1-201ENST00000363925 141 ntBASIC1.98□□□□□ -2.09
RETP07949 RNU6-188P-201ENST00000364207 107 ntBASIC1.98□□□□□ -2.09
RETP07949 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.98□□□□□ -2.09
RETP07949 AC092809.3-201ENST00000415453 231 ntBASIC1.98□□□□□ -2.09
RETP07949 ISCA1P1-201ENST00000426679 387 ntBASIC1.98□□□□□ -2.09
RETP07949 HMGB1P27-201ENST00000431429 603 ntBASIC1.98□□□□□ -2.09
RETP07949 AC119618.1-201ENST00000434191 222 ntBASIC1.98□□□□□ -2.09
RETP07949 AC004383.1-201ENST00000438135 289 ntBASIC1.98□□□□□ -2.09
RETP07949 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.98□□□□□ -2.09
RETP07949 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.98□□□□□ -2.09
RETP07949 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.98□□□□□ -2.09
RETP07949 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.98□□□□□ -2.09
RETP07949 SNORD42A-201ENST00000459584 64 ntBASIC1.98□□□□□ -2.09
RETP07949 RPL37P6-201ENST00000460682 294 ntBASIC1.98□□□□□ -2.09
RETP07949 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.98□□□□□ -2.09
RETP07949 RNU2-10P-201ENST00000516375 211 ntBASIC1.98□□□□□ -2.09
RETP07949 SNORA25.15-201ENST00000516487 89 ntBASIC1.98□□□□□ -2.09
RETP07949 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
RETP07949 RNA5SP337-201ENST00000517007 109 ntBASIC1.98□□□□□ -2.09
RETP07949 RNU2-46P-201ENST00000517038 113 ntBASIC1.98□□□□□ -2.09
RETP07949 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.98□□□□□ -2.09
RETP07949 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.98□□□□□ -2.09
RETP07949 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.98□□□□□ -2.09
RETP07949 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.98□□□□□ -2.09
RETP07949 AC021739.1-201ENST00000559631 174 ntBASIC1.98□□□□□ -2.09
RETP07949 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.98□□□□□ -2.09
RETP07949 MIR5571-201ENST00000577998 113 ntBASIC1.98□□□□□ -2.09
RETP07949 MIR3167-201ENST00000579623 85 ntBASIC1.98□□□□□ -2.09
RETP07949 MIR3682-201ENST00000581338 84 ntBASIC1.98□□□□□ -2.09
RETP07949 MIR3199-1-201ENST00000582434 88 ntBASIC1.98□□□□□ -2.09
RETP07949 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
RETP07949 AC091304.9-201ENST00000612091 226 ntBASIC1.98□□□□□ -2.09
RETP07949 DUSP12P1-201ENST00000612874 516 ntBASIC1.98□□□□□ -2.09
RETP07949 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RETP07949 AC005296.1-201ENST00000616145 209 ntBASIC1.98□□□□□ -2.09
RETP07949 FRG1KP-201ENST00000623592 341 ntBASIC1.98□□□□□ -2.09
RETP07949 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RETP07949 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RETP07949 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RETP07949 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RETP07949 RNU5E-1-201ENST00000362477 120 ntBASIC1.97□□□□□ -2.09
RETP07949 U8.3-201ENST00000363321 132 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms