Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RPL30P1-201ENST00000488676 339 ntBASIC1.24□□□□□ -2.21
TPM3P06753 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
TPM3P06753 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM3P06753 RNU6-1315P-201ENST00000517187 99 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TPM3P06753 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.24□□□□□ -2.21
TPM3P06753 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.24□□□□□ -2.21
TPM3P06753 TRAV32-201ENST00000553993 340 ntBASIC1.24□□□□□ -2.21
TPM3P06753 DNAJC19P9-201ENST00000555084 351 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AL136520.1-202ENST00000555494 763 ntBASIC1.24□□□□□ -2.21
TPM3P06753 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM3P06753 MIR3169-201ENST00000578032 83 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TPM3P06753 MIR4303-201ENST00000581299 66 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC025811.1-201ENST00000604312 472 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC013412.1-201ENST00000610687 192 ntBASIC1.24□□□□□ -2.21
TPM3P06753 AC008993.2-201ENST00000631744 806 ntBASIC1.24□□□□□ -2.21
TPM3P06753 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TPM3P06753 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TPM3P06753 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 MIR302D-201ENST00000362275 68 ntBASIC1.23□□□□□ -2.21
TPM3P06753 Y_RNA.40-201ENST00000362645 93 ntBASIC1.23□□□□□ -2.21
TPM3P06753 RNA5SP493-201ENST00000364115 91 ntBASIC1.23□□□□□ -2.21
TPM3P06753 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 RNU6-622P-201ENST00000384272 103 ntBASIC1.23□□□□□ -2.21
TPM3P06753 Y_RNA.578-201ENST00000390903 88 ntBASIC1.23□□□□□ -2.21
TPM3P06753 AC119751.3-201ENST00000399720 670 ntBASIC1.23□□□□□ -2.21
TPM3P06753 MIR1289-2-201ENST00000408360 111 ntBASIC1.23□□□□□ -2.21
TPM3P06753 MIR1267-201ENST00000408723 78 ntBASIC1.23□□□□□ -2.21
TPM3P06753 RNU6-1025P-201ENST00000410629 104 ntBASIC1.23□□□□□ -2.21
TPM3P06753 AL606517.1-201ENST00000446914 387 ntBASIC1.23□□□□□ -2.21
TPM3P06753 AC012308.1-201ENST00000451232 178 ntBASIC1.23□□□□□ -2.21
TPM3P06753 RNU6-953P-201ENST00000459154 107 ntBASIC1.23□□□□□ -2.21
TPM3P06753 RPL30P6-201ENST00000475925 342 ntBASIC1.23□□□□□ -2.21
TPM3P06753 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.23□□□□□ -2.21
TPM3P06753 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.23□□□□□ -2.21
TPM3P06753 RNU6-1028P-201ENST00000517164 93 ntBASIC1.23□□□□□ -2.21
TPM3P06753 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.23□□□□□ -2.21
TPM3P06753 AC025678.1-201ENST00000567861 338 ntBASIC1.23□□□□□ -2.21
TPM3P06753 AL354696.1-201ENST00000614652 497 ntBASIC1.23□□□□□ -2.21
TPM3P06753 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TPM3P06753 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TPM3P06753 MTND5P9-201ENST00000503854 1755 ntBASIC1.22□□□□□ -2.21
TPM3P06753 RNU6-160P-201ENST00000384591 107 ntBASIC1.22□□□□□ -2.21
TPM3P06753 MIR1284-201ENST00000408337 120 ntBASIC1.22□□□□□ -2.21
TPM3P06753 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.22□□□□□ -2.21
TPM3P06753 USP9YP21-201ENST00000420603 432 ntBASIC1.22□□□□□ -2.21
TPM3P06753 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
TPM3P06753 AL135790.2-201ENST00000437701 267 ntBASIC1.22□□□□□ -2.21
TPM3P06753 MTCO1P27-201ENST00000448269 226 ntBASIC1.22□□□□□ -2.21
TPM3P06753 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TPM3P06753 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
TPM3P06753 snoU13.14-201ENST00000459372 104 ntBASIC1.22□□□□□ -2.21
TPM3P06753 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
TPM3P06753 DEFB108A-201ENST00000530110 222 ntBASIC1.22□□□□□ -2.21
TPM3P06753 AP003122.4-201ENST00000530980 758 ntBASIC1.22□□□□□ -2.21
TPM3P06753 AC012414.6-201ENST00000568241 401 ntBASIC1.22□□□□□ -2.21
TPM3P06753 MTCYBP33-201ENST00000575007 1130 ntBASIC1.22□□□□□ -2.21
TPM3P06753 RNU6-942P-201ENST00000363002 107 ntBASIC1.21□□□□□ -2.22
TPM3P06753 RNU6-414P-201ENST00000363705 104 ntBASIC1.21□□□□□ -2.22
TPM3P06753 SNORA40.2-201ENST00000390847 128 ntBASIC1.21□□□□□ -2.22
TPM3P06753 RNU2-23P-201ENST00000410545 195 ntBASIC1.21□□□□□ -2.22
TPM3P06753 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
TPM3P06753 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM3P06753 MTCO2P25-201ENST00000447065 681 ntBASIC1.21□□□□□ -2.22
TPM3P06753 YWHAEP4-201ENST00000505390 198 ntBASIC1.21□□□□□ -2.22
TPM3P06753 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM3P06753 RNU6-991P-201ENST00000516168 107 ntBASIC1.21□□□□□ -2.22
TPM3P06753 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.21□□□□□ -2.22
TPM3P06753 AL157871.3-201ENST00000557231 293 ntBASIC1.21□□□□□ -2.22
TPM3P06753 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.21□□□□□ -2.22
TPM3P06753 uc_338.12-201ENST00000616344 181 ntBASIC1.21□□□□□ -2.22
TPM3P06753 MIR1248-201ENST00000629190 106 ntBASIC1.21□□□□□ -2.22
TPM3P06753 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TPM3P06753 SNORD1A-201ENST00000364968 72 ntBASIC1.2□□□□□ -2.22
TPM3P06753 SNORA4.3-201ENST00000365564 137 ntBASIC1.2□□□□□ -2.22
TPM3P06753 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
TPM3P06753 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.2□□□□□ -2.22
TPM3P06753 MTND2P4-201ENST00000445034 1004 ntBASIC1.2□□□□□ -2.22
TPM3P06753 RPL39P29-201ENST00000447779 157 ntBASIC1.2□□□□□ -2.22
TPM3P06753 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
TPM3P06753 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.2□□□□□ -2.22
TPM3P06753 AP001025.1-201ENST00000486139 332 ntBASIC1.2□□□□□ -2.22
TPM3P06753 HMGB1P30-201ENST00000492455 606 ntBASIC1.2□□□□□ -2.22
TPM3P06753 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.2□□□□□ -2.22
TPM3P06753 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.2□□□□□ -2.22
TPM3P06753 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
TPM3P06753 AP003355.1-201ENST00000518956 587 ntBASIC1.2□□□□□ -2.22
TPM3P06753 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.2□□□□□ -2.22
TPM3P06753 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.2□□□□□ -2.22
TPM3P06753 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
TPM3P06753 CR383656.8-201ENST00000549046 145 ntBASIC1.2□□□□□ -2.22
TPM3P06753 AC092325.1-201ENST00000566449 554 ntBASIC1.2□□□□□ -2.22
TPM3P06753 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.2□□□□□ -2.22
TPM3P06753 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms