Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.35□□□□□ -2.03
MT-ND1P03886 RPL12P50-201ENST00000603116 116 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 uc_338.14-201ENST00000613162 166 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 AC007014.2-201ENST00000615581 479 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 uc_338.11-201ENST00000619132 160 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 YWHAEP7-203ENST00000622054 312 ntBASIC2.35□□□□□ -2.03
MT-ND1P03886 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.35□□□□□ -2.03
MT-ND1P03886 AC004944.1-201ENST00000517807 3059 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND1P03886 SNORD62.1-201ENST00000362541 86 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 Y_RNA.33-201ENST00000362591 102 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 RNU6-715P-201ENST00000365204 103 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 SNORA16.2-201ENST00000390991 127 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 SNORA40C-201ENST00000391285 128 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 RNU4-46P-201ENST00000410818 138 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.34□□□□□ -2.03
MT-ND1P03886 BRK1P2-201ENST00000442875 223 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND1P03886 MTND3P25-201ENST00000509243 135 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.34□□□□□ -2.03
MT-ND1P03886 RNU6-1178P-201ENST00000516674 107 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 RNU6-572P-201ENST00000516724 80 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.34□□□□□ -2.03
MT-ND1P03886 MTND1P35-201ENST00000526739 508 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AL121821.2-201ENST00000556081 394 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 AL118558.2-201ENST00000556294 238 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.34□□□□□ -2.03
MT-ND1P03886 AL138889.2-201ENST00000603883 242 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 AC091152.3-201ENST00000604227 325 ntBASIC2.34□□□□□ -2.03
MT-ND1P03886 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MT-ND1P03886 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
MT-ND1P03886 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
MT-ND1P03886 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-451P-201ENST00000362921 107 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNA5SP393-201ENST00000363423 117 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-1303P-201ENST00000364841 107 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-38P-201ENST00000384085 107 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 SNORA9-201ENST00000384215 133 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-166P-201ENST00000384371 107 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-19P-201ENST00000384718 107 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 MIR147B-201ENST00000390185 80 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 SNORD70.1-201ENST00000391007 85 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 BTF3P7-201ENST00000407097 488 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 PTGES3P4-201ENST00000426243 356 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND1P03886 RPS3AP12-201ENST00000443616 753 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND1P03886 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND1P03886 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND1P03886 SNRPFP3-201ENST00000457792 225 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 SCARNA18-201ENST00000459004 134 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-333P-201ENST00000459117 107 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 FAM92A1P2-202ENST00000504766 877 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND1P03886 SLC25A15P5-201ENST00000508033 253 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU1-86P-201ENST00000516108 154 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU1-107P-201ENST00000516617 154 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 RNU6-1183P-201ENST00000517054 60 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 SNORA31.19-201ENST00000517079 126 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.33□□□□□ -2.04
MT-ND1P03886 AL137161.1-201ENST00000532231 390 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC010186.2-204ENST00000537668 439 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND1P03886 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND1P03886 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND1P03886 MIR4765-201ENST00000585007 77 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 MIR548AC-201ENST00000585049 88 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 ELOCP29-201ENST00000588193 334 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AL162413.1-201ENST00000603198 110 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AC008121.1-201ENST00000603244 268 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 AL160394.1-201ENST00000624765 724 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 FER-210ENST00000628534 558 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND1P03886 AL137790.1-201ENST00000634283 177 ntBASIC2.33□□□□□ -2.04
MT-ND1P03886 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND1P03886 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND1P03886 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
MT-ND1P03886 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.33□□□□□ -2.04
MT-ND1P03886 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
MT-ND1P03886 Y_RNA.89-201ENST00000363031 102 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNY3P3-201ENST00000363816 102 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNU6-534P-201ENST00000364877 106 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNU6-384P-201ENST00000364900 104 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNU6-395P-201ENST00000365662 106 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNU6-1179P-201ENST00000384667 107 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 MIR218-1-201ENST00000384999 110 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms