Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.92□□□□□ -2.26
COL1A1P02452 RNU11-2P-201ENST00000516898 142 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 CYCSP23-201ENST00000519781 313 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.92□□□□□ -2.26
COL1A1P02452 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC122134.1-202ENST00000569111 1201 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC005951.2-201ENST00000576282 495 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC004987.4-201ENST00000603383 338 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AL031775.1-201ENST00000607014 887 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AL357080.1-201ENST00000617394 239 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.92□□□□□ -2.26
COL1A1P02452 AP000776.1-201ENST00000530032 1663 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
COL1A1P02452 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
COL1A1P02452 RNU6-359P-201ENST00000365466 108 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 RPL22P22-201ENST00000395439 379 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 DHFRP6-201ENST00000401776 268 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.92□□□□□ -2.26
COL1A1P02452 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.92□□□□□ -2.26
COL1A1P02452 ARPC3P5-201ENST00000448802 534 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC245102.2-201ENST00000448956 180 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC244505.3-201ENST00000454598 187 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC093677.1-201ENST00000514414 678 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC096720.1-201ENST00000604441 183 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC021646.1-201ENST00000605469 484 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AL583856.2-201ENST00000606298 543 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC012467.1-201ENST00000607740 256 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 MIR8084-201ENST00000614105 89 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 MIR8074-201ENST00000615081 81 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC253576.2-201ENST00000618815 580 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC120349.2-201ENST00000625002 298 ntBASIC0.92□□□□□ -2.26
COL1A1P02452 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.92□□□□□ -2.26
COL1A1P02452 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.92□□□□□ -2.26
COL1A1P02452 AC107982.1-201ENST00000507171 1300 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.91□□□□□ -2.26
COL1A1P02452 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL1A1P02452 Y_RNA.548-201ENST00000384656 105 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL1A1P02452 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL1A1P02452 MTND3P20-201ENST00000407663 186 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 AC078974.1-201ENST00000411597 223 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 AC127391.1-201ENST00000411737 98 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 TPMTP2-201ENST00000414372 726 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 AC027644.1-201ENST00000419595 298 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.91□□□□□ -2.26
COL1A1P02452 USP9YP22-201ENST00000438971 294 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 RNU6-714P-201ENST00000516963 103 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.91□□□□□ -2.26
COL1A1P02452 MRPS36P5-201ENST00000551909 298 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.91□□□□□ -2.26
COL1A1P02452 AC069304.2-201ENST00000605154 435 ntBASIC0.91□□□□□ -2.26
COL1A1P02452 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.91□□□□□ -2.26
COL1A1P02452 OR4G2P-201ENST00000328113 903 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 SNORD115-3-201ENST00000363100 82 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 RNU1-39P-201ENST00000383897 165 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 MIR518D-201ENST00000385014 87 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 MIR618-201ENST00000385287 98 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 RNU2-42P-201ENST00000410697 113 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 AC092634.2-201ENST00000428146 1010 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.9□□□□□ -2.27
COL1A1P02452 AL158053.1-201ENST00000441503 453 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.9□□□□□ -2.27
COL1A1P02452 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.9□□□□□ -2.27
COL1A1P02452 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.9□□□□□ -2.27
COL1A1P02452 CECR9-201ENST00000453421 199 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.9□□□□□ -2.27
COL1A1P02452 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.9□□□□□ -2.27
COL1A1P02452 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.9□□□□□ -2.27
COL1A1P02452 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.9□□□□□ -2.27
COL1A1P02452 AL445435.1-201ENST00000604232 665 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 AC009237.15-201ENST00000610252 501 ntBASIC0.9□□□□□ -2.27
COL1A1P02452 RNU6-97P-201ENST00000363387 104 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 RNU6-1235P-201ENST00000384559 107 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 AL590084.2-201ENST00000401481 382 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 MTCO2P20-201ENST00000437339 673 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 RPS15AP9-201ENST00000439856 381 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 MTND2P20-201ENST00000440805 661 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.89□□□□□ -2.27
COL1A1P02452 AC013267.1-201ENST00000458227 267 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 snoU13.9-201ENST00000458927 103 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 RNU6-498P-201ENST00000459468 107 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.89□□□□□ -2.27
COL1A1P02452 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.89□□□□□ -2.27
COL1A1P02452 AC079598.5-201ENST00000547460 117 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.89□□□□□ -2.27
COL1A1P02452 AL713866.2-201ENST00000603579 219 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 AC006270.3-201ENST00000605967 1036 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 AL022345.1-201ENST00000607292 135 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 AC010975.3-201ENST00000618727 978 ntBASIC0.89□□□□□ -2.27
COL1A1P02452 AC017037.3-201ENST00000625016 472 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms