Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.89□□□□□ -1.95
LDLRP01130 GMFBP1-201ENST00000467831 427 ntBASIC2.89□□□□□ -1.95
LDLRP01130 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AC139453.3-201ENST00000493276 369 ntBASIC2.89□□□□□ -1.95
LDLRP01130 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.89□□□□□ -1.95
LDLRP01130 AC105417.1-201ENST00000514691 285 ntBASIC2.89□□□□□ -1.95
LDLRP01130 RNU6-1045P-201ENST00000516321 107 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 OR5BN1P-201ENST00000532955 829 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.89□□□□□ -1.95
LDLRP01130 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.89□□□□□ -1.95
LDLRP01130 AL121821.2-201ENST00000556081 394 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.89□□□□□ -1.95
LDLRP01130 H3F3AP1-201ENST00000559984 334 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AMZ2P1-203ENST00000565833 850 ntBASIC2.89□□□□□ -1.95
LDLRP01130 AC093249.1-201ENST00000567049 203 ntBASIC2.89□□□□□ -1.95
LDLRP01130 MIR4703-201ENST00000577728 79 ntBASIC2.89□□□□□ -1.95
LDLRP01130 FTX_3.1-201ENST00000610451 147 ntBASIC2.89□□□□□ -1.95
LDLRP01130 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LDLRP01130 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDLRP01130 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
LDLRP01130 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.89□□□□□ -1.95
LDLRP01130 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.88□□□□□ -1.95
LDLRP01130 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.88□□□□□ -1.95
LDLRP01130 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
LDLRP01130 Y_RNA.216-201ENST00000364205 93 ntBASIC2.88□□□□□ -1.95
LDLRP01130 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
LDLRP01130 SNORD42.2-201ENST00000365570 69 ntBASIC2.88□□□□□ -1.95
LDLRP01130 RNU6-474P-201ENST00000384243 107 ntBASIC2.88□□□□□ -1.95
LDLRP01130 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LDLRP01130 RNU6-550P-201ENST00000391057 101 ntBASIC2.88□□□□□ -1.95
LDLRP01130 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
LDLRP01130 AL160275.3-201ENST00000423876 471 ntBASIC2.88□□□□□ -1.95
LDLRP01130 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.88□□□□□ -1.95
LDLRP01130 SNORD19B-201ENST00000459623 84 ntBASIC2.88□□□□□ -1.95
LDLRP01130 RPL21P41-201ENST00000459863 264 ntBASIC2.88□□□□□ -1.95
LDLRP01130 MTND4P17-201ENST00000470444 350 ntBASIC2.88□□□□□ -1.95
LDLRP01130 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.88□□□□□ -1.95
LDLRP01130 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.88□□□□□ -1.95
LDLRP01130 RN7SKP219-201ENST00000516825 296 ntBASIC2.88□□□□□ -1.95
LDLRP01130 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDLRP01130 GTF3AP2-201ENST00000557014 266 ntBASIC2.88□□□□□ -1.95
LDLRP01130 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LDLRP01130 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.88□□□□□ -1.95
LDLRP01130 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.88□□□□□ -1.95
LDLRP01130 AP000942.4-201ENST00000604811 241 ntBASIC2.88□□□□□ -1.95
LDLRP01130 MTND4LP5-201ENST00000605152 292 ntBASIC2.88□□□□□ -1.95
LDLRP01130 AC104237.2-201ENST00000612456 443 ntBASIC2.88□□□□□ -1.95
LDLRP01130 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.88□□□□□ -1.95
LDLRP01130 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDLRP01130 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LDLRP01130 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
LDLRP01130 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
LDLRP01130 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
LDLRP01130 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LDLRP01130 RNU6-884P-201ENST00000363889 107 ntBASIC2.87□□□□□ -1.95
LDLRP01130 Y_RNA.231-201ENST00000364358 102 ntBASIC2.87□□□□□ -1.95
LDLRP01130 RNU6-522P-201ENST00000364497 107 ntBASIC2.87□□□□□ -1.95
LDLRP01130 RNU6-38P-201ENST00000384085 107 ntBASIC2.87□□□□□ -1.95
LDLRP01130 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
LDLRP01130 RNU6-193P-201ENST00000410977 107 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AL451074.5-201ENST00000415894 435 ntBASIC2.87□□□□□ -1.95
LDLRP01130 ERLEC1P1-201ENST00000433806 578 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.87□□□□□ -1.95
LDLRP01130 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.87□□□□□ -1.95
LDLRP01130 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.87□□□□□ -1.95
LDLRP01130 AL590639.1-201ENST00000456484 337 ntBASIC2.87□□□□□ -1.95
LDLRP01130 RNU6-333P-201ENST00000459117 107 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC098591.2-201ENST00000510152 315 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
LDLRP01130 Y_RNA.665-201ENST00000516177 98 ntBASIC2.87□□□□□ -1.95
LDLRP01130 RNU6-685P-201ENST00000517088 95 ntBASIC2.87□□□□□ -1.95
LDLRP01130 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.87□□□□□ -1.95
LDLRP01130 ELOCP31-201ENST00000540463 467 ntBASIC2.87□□□□□ -1.95
LDLRP01130 HMGB1P14-201ENST00000557424 591 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
LDLRP01130 MIR3171-201ENST00000584270 74 ntBASIC2.87□□□□□ -1.95
LDLRP01130 MIR4424-201ENST00000585257 86 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.87□□□□□ -1.95
LDLRP01130 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.87□□□□□ -1.95
LDLRP01130 AL138889.2-201ENST00000603883 242 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC099506.2-201ENST00000623074 221 ntBASIC2.87□□□□□ -1.95
LDLRP01130 AC134503.1-201ENST00000633048 54 ntBASIC2.87□□□□□ -1.95
LDLRP01130 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
LDLRP01130 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LDLRP01130 AL139276.1-201ENST00000311910 1001 ntBASIC2.86□□□□□ -1.95
LDLRP01130 RNU6-552P-201ENST00000362869 119 ntBASIC2.86□□□□□ -1.95
LDLRP01130 Y_RNA.167-201ENST00000363735 109 ntBASIC2.86□□□□□ -1.95
LDLRP01130 Y_RNA.301-201ENST00000364990 103 ntBASIC2.86□□□□□ -1.95
LDLRP01130 SNORA7.4-201ENST00000384249 137 ntBASIC2.86□□□□□ -1.95
LDLRP01130 RNU6-43P-201ENST00000384302 107 ntBASIC2.86□□□□□ -1.95
LDLRP01130 MIR606-201ENST00000384851 96 ntBASIC2.86□□□□□ -1.95
LDLRP01130 MIR301A-201ENST00000385261 86 ntBASIC2.86□□□□□ -1.95
LDLRP01130 Y_RNA.579-201ENST00000390939 94 ntBASIC2.86□□□□□ -1.95
LDLRP01130 SNORD37.1-201ENST00000390968 65 ntBASIC2.86□□□□□ -1.95
LDLRP01130 RNU6-903P-201ENST00000391270 109 ntBASIC2.86□□□□□ -1.95
LDLRP01130 MIR1261-201ENST00000408659 82 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms