Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
SEMA3DO95025 HIGD1AP15-201ENST00000416198 280 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AL365338.1-201ENST00000422282 858 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC010099.3-201ENST00000423896 409 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC096920.1-201ENST00000423991 241 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AL356583.2-201ENST00000426536 280 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.69□□□□□ -2.14
SEMA3DO95025 AL121890.1-201ENST00000435457 205 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.69□□□□□ -2.14
SEMA3DO95025 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SEMA3DO95025 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.69□□□□□ -2.14
SEMA3DO95025 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 CKS1BP2-201ENST00000497342 240 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SEMA3DO95025 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.69□□□□□ -2.14
SEMA3DO95025 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.69□□□□□ -2.14
SEMA3DO95025 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.69□□□□□ -2.14
SEMA3DO95025 RNU6-123P-201ENST00000516163 102 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 RNA5SP137-201ENST00000516833 135 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.69□□□□□ -2.14
SEMA3DO95025 DEFB122-202ENST00000569013 197 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC002400.1-201ENST00000569310 726 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AL022154.1-201ENST00000604698 785 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC087045.1-201ENST00000605856 382 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC009318.2-201ENST00000610917 651 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 MIR5739-201ENST00000619803 80 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AC009878.1-201ENST00000621819 340 ntBASIC1.69□□□□□ -2.14
SEMA3DO95025 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.69□□□□□ -2.14
SEMA3DO95025 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SEMA3DO95025 AC073343.1-201ENST00000328239 651 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 RNU4-42P-201ENST00000364738 142 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.68□□□□□ -2.14
SEMA3DO95025 CISD1P1-201ENST00000393907 327 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 MIR1302-8-201ENST00000408342 128 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 Y_RNA.623-201ENST00000411128 95 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AL160275.3-201ENST00000423876 471 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.68□□□□□ -2.14
SEMA3DO95025 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.68□□□□□ -2.14
SEMA3DO95025 RPL7P34-201ENST00000433316 712 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 IFNA20P-201ENST00000436840 528 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.68□□□□□ -2.14
SEMA3DO95025 RPL7P54-201ENST00000438336 674 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 USP9YP15-201ENST00000442391 422 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 USP9YP12-201ENST00000450481 570 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC003071.1-201ENST00000451219 789 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC108078.2-201ENST00000510750 236 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC112206.3-201ENST00000514578 389 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SEMA3DO95025 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.68□□□□□ -2.14
SEMA3DO95025 AC009094.1-201ENST00000564443 426 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 MTCYBP33-201ENST00000575007 1130 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SEMA3DO95025 AC022022.2-201ENST00000602989 360 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AL713866.2-201ENST00000603579 219 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC112191.3-201ENST00000604371 277 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 NDUFA8P1-201ENST00000605525 367 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.68□□□□□ -2.14
SEMA3DO95025 AC004223.4-201ENST00000612426 332 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AL359547.2-201ENST00000615810 418 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 AC099654.13-201ENST00000639774 207 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 WWP1P1-201ENST00000466609 2769 ntBASIC1.68□□□□□ -2.14
SEMA3DO95025 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SEMA3DO95025 AC138393.1-203ENST00000327086 343 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 SNORA24.1-201ENST00000384401 135 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AL031779.1-201ENST00000415663 330 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 ELOCP4-201ENST00000420090 333 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.67□□□□□ -2.14
SEMA3DO95025 AL161788.1-201ENST00000441805 169 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 UBE2D3P4-201ENST00000441973 436 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 MED28P2-201ENST00000475771 317 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 RPL21P99-201ENST00000480369 423 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AC027575.1-201ENST00000481064 460 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.67□□□□□ -2.14
SEMA3DO95025 RNU6-1129P-201ENST00000515964 104 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 RNU6-1220P-201ENST00000517126 108 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 AC022880.1-201ENST00000534017 973 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 ADI1P3-201ENST00000549509 470 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 MIR548AB-201ENST00000584917 84 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AL353778.1-201ENST00000603149 408 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AC018638.7-201ENST00000605836 1114 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.67□□□□□ -2.14
SEMA3DO95025 AC012409.4-201ENST00000612923 249 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 AC092656.1-203ENST00000624134 423 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 RBBP8P1-201ENST00000449447 1844 ntBASIC1.67□□□□□ -2.14
SEMA3DO95025 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SEMA3DO95025 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SEMA3DO95025 RNU6-942P-201ENST00000363002 107 ntBASIC1.66□□□□□ -2.14
SEMA3DO95025 Y_RNA.560-201ENST00000384689 102 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms