Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC005046.1-201ENST00000608515 625 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 MIR7975-201ENST00000619350 68 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 MIR7154-201ENST00000620673 73 ntBASIC4.92□□□□□ -1.62
PTCD1O75127 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTCD1O75127 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PTCD1O75127 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCD1O75127 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PTCD1O75127 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PTCD1O75127 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCD1O75127 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCD1O75127 NEAT1-202ENST00000501122 22743 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCD1O75127 RNU6-1266P-201ENST00000362794 105 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 Y_RNA.183-201ENST00000363882 113 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 RNA5SP72-201ENST00000364442 117 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 SNORA7.2-201ENST00000364446 145 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 Y_RNA.405-201ENST00000383979 100 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 Y_RNA.451-201ENST00000384200 100 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 Y_RNA.524-201ENST00000384564 100 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 Y_RNA.561-201ENST00000384694 100 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 MIR199A2-201ENST00000385289 110 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 GNG5P5-201ENST00000420444 220 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCD1O75127 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCD1O75127 RNU6-1278P-201ENST00000516130 107 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 MTND5P41-201ENST00000517498 206 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCD1O75127 MIR4782-201ENST00000577987 79 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCD1O75127 AL355877.2-201ENST00000603670 358 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 MZT1P2-201ENST00000604387 248 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 AC073657.2-201ENST00000605661 303 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 U4.7-201ENST00000638126 106 ntBASIC4.91□□□□□ -1.62
PTCD1O75127 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCD1O75127 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCD1O75127 AC073346.2-201ENST00000624724 2058 ntBASIC4.9□□□□□ -1.62
PTCD1O75127 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.9□□□□□ -1.62
PTCD1O75127 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.9□□□□□ -1.62
PTCD1O75127 AP001148.1-201ENST00000624124 2359 ntBASIC4.9□□□□□ -1.62
PTCD1O75127 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCD1O75127 RNU6-78P-201ENST00000362897 107 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 U3.13-201ENST00000364804 214 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 RNU6-1279P-201ENST00000383917 103 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 SNORA12.2-201ENST00000391040 156 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 MTCYBP2-201ENST00000407745 171 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 RNU2-20P-201ENST00000410425 191 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCD1O75127 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCD1O75127 AL136097.1-201ENST00000456945 913 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 RPS26P28-201ENST00000470806 348 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 SNORA25.14-201ENST00000516481 132 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCD1O75127 AC022559.1-201ENST00000520905 205 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AC024405.2-202ENST00000532731 184 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AP002392.1-201ENST00000537692 208 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCD1O75127 AC006272.2-201ENST00000594725 163 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AL591424.2-201ENST00000617023 128 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 AC027309.3-201ENST00000623419 351 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.9□□□□□ -1.63
PTCD1O75127 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCD1O75127 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCD1O75127 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCD1O75127 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCD1O75127 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCD1O75127 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PTCD1O75127 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCD1O75127 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PTCD1O75127 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCD1O75127 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PTCD1O75127 MIR411-201ENST00000362239 96 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 RNU6-81P-201ENST00000365608 104 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 RNU6-72P-201ENST00000384285 79 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 MIR218-2-201ENST00000385006 110 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 MIR613-201ENST00000385248 95 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 RNU6-735P-201ENST00000410612 107 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 RN7SKP51-201ENST00000410781 304 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCD1O75127 CYCSP35-201ENST00000451978 304 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCD1O75127 Vault.1-201ENST00000516474 102 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 Y_RNA.706-201ENST00000516933 99 ntBASIC4.89□□□□□ -1.63
PTCD1O75127 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCD1O75127 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCD1O75127 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCD1O75127 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTCD1O75127 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCD1O75127 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCD1O75127 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCD1O75127 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCD1O75127 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCD1O75127 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PTCD1O75127 Y_RNA.27-201ENST00000362540 103 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 RNU6-1027P-201ENST00000383998 107 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 RNU6-140P-201ENST00000384566 108 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 BTF3L4P2-201ENST00000392798 346 ntBASIC4.88□□□□□ -1.63
PTCD1O75127 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms