Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM13O60858 RBBP8P1-201ENST00000449447 1844 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 AC009812.4-201ENST00000569134 1805 ntBASIC3.85□□□□□ -1.79
TRIM13O60858 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
TRIM13O60858 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM13O60858 Y_RNA.82-201ENST00000363000 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.92-201ENST00000363043 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.235-201ENST00000364412 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 RN7SKP227-201ENST00000364445 330 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.306-201ENST00000365015 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.312-201ENST00000365089 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.322-201ENST00000365151 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.343-201ENST00000365354 112 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 RNU6-1179P-201ENST00000384667 107 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.568-201ENST00000384742 113 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRIM13O60858 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.580-201ENST00000391004 95 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 RNU6-131P-201ENST00000391144 107 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM13O60858 MTCO1P39-201ENST00000426148 480 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM13O60858 HIGD1AP2-201ENST00000446367 280 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM13O60858 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.650-201ENST00000459002 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.638-201ENST00000459374 113 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AC140059.1-201ENST00000489238 361 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 RPS23P1-201ENST00000491662 432 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 ANXA2P1-201ENST00000505539 926 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 MLLT10P2-201ENST00000506434 249 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.679-201ENST00000516416 91 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.777-201ENST00000516982 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 SNORA31.20-201ENST00000517111 133 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.771-201ENST00000598668 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 AP000787.2-201ENST00000604432 568 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Mico1.1-201ENST00000611698 204 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AC114781.5-201ENST00000615297 108 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AC011476.5-201ENST00000615594 130 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 MIR8059-201ENST00000620427 81 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 Y_RNA.789-201ENST00000622480 102 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM13O60858 AC091895.1-201ENST00000624494 256 ntBASIC3.84□□□□□ -1.79
TRIM13O60858 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM13O60858 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM13O60858 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM13O60858 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM13O60858 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM13O60858 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.84□□□□□ -1.8
TRIM13O60858 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
TRIM13O60858 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
TRIM13O60858 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM13O60858 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM13O60858 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM13O60858 RNU6-923P-201ENST00000364753 107 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 RNU6-1130P-201ENST00000365434 107 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 SNORD116-18-201ENST00000383961 92 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 RNU6-629P-201ENST00000384061 103 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 MIR192-201ENST00000384915 110 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM13O60858 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM13O60858 HMGB1P27-201ENST00000431429 603 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 AL162725.1-201ENST00000435405 301 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM13O60858 RN7SL610P-201ENST00000463845 291 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
TRIM13O60858 TRBV12-2-201ENST00000489763 344 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 AC022493.1-201ENST00000492984 337 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM13O60858 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM13O60858 MIR892C-201ENST00000516410 77 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM13O60858 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM13O60858 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM13O60858 H3F3AP1-201ENST00000559984 334 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 RPL23AP78-201ENST00000599928 470 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 SNRPGP15-201ENST00000600149 222 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 AC037487.3-201ENST00000606668 112 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM13O60858 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM13O60858 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM13O60858 PRO1804-201ENST00000623780 2050 ntBASIC3.83□□□□□ -1.8
TRIM13O60858 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM13O60858 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM13O60858 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM13O60858 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM13O60858 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TRIM13O60858 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TRIM13O60858 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM13O60858 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM13O60858 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM13O60858 U3.6-201ENST00000363622 211 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms