Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.67□□□□□ -1.98
PRKNO60260 VN1R36P-201ENST00000414936 291 ntBASIC2.67□□□□□ -1.98
PRKNO60260 RPL7P10-201ENST00000417407 739 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AC099548.1-201ENST00000421443 426 ntBASIC2.67□□□□□ -1.98
PRKNO60260 PGBD4P6-201ENST00000421501 610 ntBASIC2.67□□□□□ -1.98
PRKNO60260 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKNO60260 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.67□□□□□ -1.98
PRKNO60260 AC098614.2-201ENST00000426040 255 ntBASIC2.67□□□□□ -1.98
PRKNO60260 HMGB1P18-201ENST00000438801 619 ntBASIC2.67□□□□□ -1.98
PRKNO60260 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.67□□□□□ -1.98
PRKNO60260 RN7SKP132-201ENST00000516001 208 ntBASIC2.67□□□□□ -1.98
PRKNO60260 Y_RNA.682-201ENST00000516457 100 ntBASIC2.67□□□□□ -1.98
PRKNO60260 RNU1-103P-201ENST00000516502 125 ntBASIC2.67□□□□□ -1.98
PRKNO60260 RNU6-1332P-201ENST00000516666 104 ntBASIC2.67□□□□□ -1.98
PRKNO60260 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
PRKNO60260 AC025423.5-201ENST00000550230 219 ntBASIC2.67□□□□□ -1.98
PRKNO60260 HMGB1P14-201ENST00000557424 591 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AMZ2P1-203ENST00000565833 850 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKNO60260 MIR3609-201ENST00000582661 80 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AC004832.5-201ENST00000608677 401 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.67□□□□□ -1.98
PRKNO60260 AL132765.2-201ENST00000610812 351 ntBASIC2.67□□□□□ -1.98
PRKNO60260 FAM157A-202ENST00000615155 405 ntBASIC2.67□□□□□ -1.98
PRKNO60260 uc_338.15-201ENST00000615470 191 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AC073308.1-201ENST00000623696 305 ntBASIC2.67□□□□□ -1.98
PRKNO60260 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRKNO60260 SCARNA15.3-201ENST00000626315 122 ntBASIC2.67□□□□□ -1.98
PRKNO60260 SCARNA4.1-201ENST00000628597 123 ntBASIC2.67□□□□□ -1.98
PRKNO60260 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKNO60260 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKNO60260 GABRG2-229ENST00000641017 3628 ntBASIC2.66□□□□□ -1.98
PRKNO60260 Y_RNA.61-201ENST00000362835 102 ntBASIC2.66□□□□□ -1.98
PRKNO60260 RNU4-73P-201ENST00000363164 141 ntBASIC2.66□□□□□ -1.98
PRKNO60260 RNU6-166P-201ENST00000384371 107 ntBASIC2.66□□□□□ -1.98
PRKNO60260 RNU6-658P-201ENST00000384606 106 ntBASIC2.66□□□□□ -1.98
PRKNO60260 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
PRKNO60260 MIR10A-201ENST00000385043 110 ntBASIC2.66□□□□□ -1.98
PRKNO60260 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PRKNO60260 AL356057.2-201ENST00000403318 432 ntBASIC2.66□□□□□ -1.98
PRKNO60260 HMGN2P30-201ENST00000423237 256 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AL353729.1-201ENST00000425044 720 ntBASIC2.66□□□□□ -1.98
PRKNO60260 HMGB1P9-201ENST00000429856 646 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKNO60260 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKNO60260 BRK1P2-201ENST00000442875 223 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AL078601.1-201ENST00000444542 271 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKNO60260 AC092798.1-201ENST00000458542 409 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AC011005.2-201ENST00000487324 359 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.66□□□□□ -1.98
PRKNO60260 AC069113.1-201ENST00000517763 267 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKNO60260 MTND4LP5-201ENST00000605152 292 ntBASIC2.66□□□□□ -1.98
PRKNO60260 RNU6-85P-201ENST00000605989 107 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AL022345.1-201ENST00000607292 135 ntBASIC2.66□□□□□ -1.98
PRKNO60260 AC104237.2-201ENST00000612456 443 ntBASIC2.66□□□□□ -1.98
PRKNO60260 RMST_4.1-201ENST00000616886 107 ntBASIC2.66□□□□□ -1.98
PRKNO60260 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.66□□□□□ -1.98
PRKNO60260 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKNO60260 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.66□□□□□ -1.98
PRKNO60260 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.66□□□□□ -1.98
PRKNO60260 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PRKNO60260 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
PRKNO60260 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PRKNO60260 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PRKNO60260 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PRKNO60260 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PRKNO60260 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.65□□□□□ -1.98
PRKNO60260 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.65□□□□□ -1.98
PRKNO60260 AC022336.2-201ENST00000568966 2538 ntBASIC2.65□□□□□ -1.99
PRKNO60260 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRKNO60260 U3.26-201ENST00000391236 204 ntBASIC2.65□□□□□ -1.99
PRKNO60260 SKA2P1-201ENST00000425592 390 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AL627311.1-201ENST00000431514 115 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.65□□□□□ -1.99
PRKNO60260 NIPA2P5-201ENST00000452282 464 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AC092001.1-201ENST00000453012 261 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AMD1P1-201ENST00000457220 922 ntBASIC2.65□□□□□ -1.99
PRKNO60260 snoU13.28-201ENST00000459235 104 ntBASIC2.65□□□□□ -1.99
PRKNO60260 MTND4P17-201ENST00000470444 350 ntBASIC2.65□□□□□ -1.99
PRKNO60260 RPS29P20-201ENST00000489592 171 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.65□□□□□ -1.99
PRKNO60260 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKNO60260 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.65□□□□□ -1.99
PRKNO60260 AC091826.1-201ENST00000514065 313 ntBASIC2.65□□□□□ -1.99
PRKNO60260 RN7SKP43-201ENST00000516173 320 ntBASIC2.65□□□□□ -1.99
PRKNO60260 Y_RNA.675-201ENST00000516389 149 ntBASIC2.65□□□□□ -1.99
PRKNO60260 DNAJC8P1-201ENST00000554535 372 ntBASIC2.65□□□□□ -1.99
PRKNO60260 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.65□□□□□ -1.99
PRKNO60260 MIR4782-201ENST00000577987 79 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
PRKNO60260 AC024153.1-201ENST00000603103 365 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AL670379.10-201ENST00000604330 253 ntBASIC2.65□□□□□ -1.99
PRKNO60260 APOOP1-201ENST00000604695 592 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AL670379.9-201ENST00000605428 253 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AC087045.1-201ENST00000605856 382 ntBASIC2.65□□□□□ -1.99
PRKNO60260 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.65□□□□□ -1.99
PRKNO60260 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms