Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FTLP6-201ENST00000355274 422 ntBASIC2.97□□□□□ -1.93
LDB2O43679 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
LDB2O43679 SNORA71.1-201ENST00000364523 117 ntBASIC2.97□□□□□ -1.93
LDB2O43679 SNORD14B-201ENST00000364533 90 ntBASIC2.97□□□□□ -1.93
LDB2O43679 Y_RNA.431-201ENST00000384086 102 ntBASIC2.97□□□□□ -1.93
LDB2O43679 RNU6-214P-201ENST00000384130 107 ntBASIC2.97□□□□□ -1.93
LDB2O43679 RNU6-1011P-201ENST00000384668 107 ntBASIC2.97□□□□□ -1.93
LDB2O43679 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LDB2O43679 FAT1P1-201ENST00000406588 507 ntBASIC2.97□□□□□ -1.93
LDB2O43679 RPL5P18-201ENST00000406671 891 ntBASIC2.97□□□□□ -1.93
LDB2O43679 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
LDB2O43679 RPL37P10-201ENST00000412884 288 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.97□□□□□ -1.93
LDB2O43679 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.97□□□□□ -1.93
LDB2O43679 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.97□□□□□ -1.93
LDB2O43679 HMGB1P9-201ENST00000429856 646 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC022018.1-201ENST00000430685 241 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC236972.2-201ENST00000434979 310 ntBASIC2.97□□□□□ -1.93
LDB2O43679 RPS3AP52-201ENST00000435639 297 ntBASIC2.97□□□□□ -1.93
LDB2O43679 BRK1P2-201ENST00000442875 223 ntBASIC2.97□□□□□ -1.93
LDB2O43679 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.97□□□□□ -1.93
LDB2O43679 AC104472.2-201ENST00000469035 601 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC026801.1-201ENST00000497178 464 ntBASIC2.97□□□□□ -1.93
LDB2O43679 SNORD59.2-201ENST00000516873 68 ntBASIC2.97□□□□□ -1.93
LDB2O43679 SNORA31.19-201ENST00000517079 126 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AP000889.1-201ENST00000530968 660 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC025423.5-201ENST00000550230 219 ntBASIC2.97□□□□□ -1.93
LDB2O43679 IMMP1LP2-201ENST00000552954 492 ntBASIC2.97□□□□□ -1.93
LDB2O43679 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.97□□□□□ -1.93
LDB2O43679 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.97□□□□□ -1.93
LDB2O43679 LARP7P3-201ENST00000579888 337 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC100830.2-201ENST00000581636 240 ntBASIC2.97□□□□□ -1.93
LDB2O43679 AC107294.3-201ENST00000609211 526 ntBASIC2.97□□□□□ -1.93
LDB2O43679 FTX_3.1-201ENST00000610451 147 ntBASIC2.97□□□□□ -1.93
LDB2O43679 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
LDB2O43679 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
LDB2O43679 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LDB2O43679 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
LDB2O43679 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LDB2O43679 AC138393.1-203ENST00000327086 343 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RNU6-384P-201ENST00000364900 104 ntBASIC2.96□□□□□ -1.94
LDB2O43679 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB2O43679 RNU6-1297P-201ENST00000384415 104 ntBASIC2.96□□□□□ -1.94
LDB2O43679 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LDB2O43679 Y_RNA.623-201ENST00000411128 95 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AL592148.1-201ENST00000413568 445 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LDB2O43679 RPL7P37-201ENST00000425095 738 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AC098614.2-201ENST00000426040 255 ntBASIC2.96□□□□□ -1.94
LDB2O43679 SAR1AP4-201ENST00000429225 591 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AL627311.1-201ENST00000431514 115 ntBASIC2.96□□□□□ -1.94
LDB2O43679 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RPL37P4-201ENST00000448908 268 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AL583843.1-201ENST00000456070 346 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RNA5SP310-201ENST00000459084 116 ntBASIC2.96□□□□□ -1.94
LDB2O43679 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.96□□□□□ -1.94
LDB2O43679 RPS27P27-201ENST00000498779 255 ntBASIC2.96□□□□□ -1.94
LDB2O43679 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB2O43679 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB2O43679 RN7SKP24-201ENST00000515888 284 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RNU6-559P-201ENST00000516151 98 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RNU6-572P-201ENST00000516724 80 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RN7SKP272-201ENST00000516988 232 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB2O43679 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB2O43679 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.96□□□□□ -1.94
LDB2O43679 AL645944.1-201ENST00000603857 493 ntBASIC2.96□□□□□ -1.94
LDB2O43679 NUTF2P8-201ENST00000604593 363 ntBASIC2.96□□□□□ -1.94
LDB2O43679 RNU6-85P-201ENST00000605989 107 ntBASIC2.96□□□□□ -1.94
LDB2O43679 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AL160413.1-201ENST00000622780 310 ntBASIC2.96□□□□□ -1.94
LDB2O43679 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.96□□□□□ -1.94
LDB2O43679 AL079305.1-201ENST00000623159 3008 ntBASIC2.96□□□□□ -1.94
LDB2O43679 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LDB2O43679 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LDB2O43679 MAPK10-362ENST00000641864 4484 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.95□□□□□ -1.94
LDB2O43679 MTND5P19-201ENST00000424872 1794 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB2O43679 RNU1-140P-201ENST00000365040 165 ntBASIC2.95□□□□□ -1.94
LDB2O43679 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
LDB2O43679 RNU6-1077P-201ENST00000410506 102 ntBASIC2.95□□□□□ -1.94
LDB2O43679 RNU4-14P-201ENST00000410858 122 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.95□□□□□ -1.94
LDB2O43679 SKA2P1-201ENST00000425592 390 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC007560.1-201ENST00000426912 237 ntBASIC2.95□□□□□ -1.94
LDB2O43679 RPL21P40-201ENST00000428586 483 ntBASIC2.95□□□□□ -1.94
LDB2O43679 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LDB2O43679 FABP5P14-201ENST00000437273 393 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AL078601.1-201ENST00000444542 271 ntBASIC2.95□□□□□ -1.94
LDB2O43679 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.95□□□□□ -1.94
LDB2O43679 RPL12P25-201ENST00000455592 494 ntBASIC2.95□□□□□ -1.94
LDB2O43679 SNORD19B-201ENST00000459623 84 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC130509.1-201ENST00000464158 433 ntBASIC2.95□□□□□ -1.94
LDB2O43679 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.95□□□□□ -1.94
LDB2O43679 AP005597.4-201ENST00000526762 229 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC026371.1-201ENST00000551867 419 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.95□□□□□ -1.94
LDB2O43679 HMGB1P14-201ENST00000557424 591 ntBASIC2.95□□□□□ -1.94
LDB2O43679 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms