Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TSPAN6O43657 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TSPAN6O43657 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TSPAN6O43657 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
TSPAN6O43657 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TSPAN6O43657 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TSPAN6O43657 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
TSPAN6O43657 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TSPAN6O43657 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TSPAN6O43657 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TSPAN6O43657 Y_RNA.279-201ENST00000364763 95 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 RNU6-1222P-201ENST00000384615 107 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 MTND3P8-201ENST00000412909 339 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AC007969.2-201ENST00000441891 191 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 RPL32P28-201ENST00000443577 397 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.39□□□□□ -1.87
TSPAN6O43657 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 MTCO1P29-201ENST00000496868 288 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AC092436.3-201ENST00000511788 257 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AC027176.1-201ENST00000560204 514 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 MIR3199-1-201ENST00000582434 88 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 MIR3672-201ENST00000584290 82 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.39□□□□□ -1.87
TSPAN6O43657 AL160281.1-201ENST00000605307 311 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AC064836.2-201ENST00000609491 462 ntBASIC3.39□□□□□ -1.87
TSPAN6O43657 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.39□□□□□ -1.87
TSPAN6O43657 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.38□□□□□ -1.87
TSPAN6O43657 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.38□□□□□ -1.87
TSPAN6O43657 RNU6-461P-201ENST00000364195 107 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 RN7SKP32-201ENST00000410167 303 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 RNU2-23P-201ENST00000410545 195 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 RNU6-1148P-201ENST00000410992 104 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC138393.2-201ENST00000414742 246 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 AC098614.3-201ENST00000438957 440 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.38□□□□□ -1.87
TSPAN6O43657 PPP1R2P5-201ENST00000457256 603 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 RNU6-329P-201ENST00000459618 107 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.38□□□□□ -1.87
TSPAN6O43657 RPL23AP70-201ENST00000483361 460 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC096576.1-201ENST00000489014 359 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC008526.1-201ENST00000509149 338 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 SNORA20.3-201ENST00000516880 132 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.38□□□□□ -1.87
TSPAN6O43657 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.38□□□□□ -1.87
TSPAN6O43657 AC115990.1-201ENST00000526957 301 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.38□□□□□ -1.87
TSPAN6O43657 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
TSPAN6O43657 AC069294.1-201ENST00000608397 350 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AL442067.2-201ENST00000614033 363 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 uc_338.15-201ENST00000615470 191 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 AL449363.1-201ENST00000617815 186 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
TSPAN6O43657 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.38□□□□□ -1.87
TSPAN6O43657 MTND4P23-201ENST00000447723 1363 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
TSPAN6O43657 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TSPAN6O43657 AC080128.1-201ENST00000474389 1917 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 Y_RNA.135-201ENST00000363439 95 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RNU6-1180P-201ENST00000364935 107 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RNU1-140P-201ENST00000365040 165 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 SNORD116-11-201ENST00000383882 92 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 SNORA9-201ENST00000384215 133 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RNU1-57P-201ENST00000384491 166 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 MIR544A-201ENST00000384855 91 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 MIR491-201ENST00000384877 84 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 U6atac.2-201ENST00000408644 118 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 NDUFB4P5-201ENST00000415445 361 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
TSPAN6O43657 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.37□□□□□ -1.87
TSPAN6O43657 RPL39P29-201ENST00000447779 157 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 BX510359.1-201ENST00000456973 237 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 PMCHL2-203ENST00000457791 237 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RPS26P21-201ENST00000475397 348 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 AC110794.1-201ENST00000505816 425 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 AC023141.11-201ENST00000508864 202 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RNU6-273P-201ENST00000516937 96 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 SCOCP1-201ENST00000554676 349 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 MIR4742-201ENST00000581069 85 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 MIR3942-201ENST00000585264 109 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.37□□□□□ -1.87
TSPAN6O43657 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.37□□□□□ -1.87
TSPAN6O43657 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TSPAN6O43657 AL513302.2-201ENST00000562313 1842 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 AC093908.1-201ENST00000623125 8092 ntBASIC3.37□□□□□ -1.87
TSPAN6O43657 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TSPAN6O43657 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
TSPAN6O43657 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TSPAN6O43657 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
TSPAN6O43657 RPL9P7-201ENST00000330965 580 ntBASIC3.36□□□□□ -1.87
TSPAN6O43657 SNORA38.1-201ENST00000364172 131 ntBASIC3.36□□□□□ -1.87
TSPAN6O43657 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.36□□□□□ -1.87
TSPAN6O43657 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.36□□□□□ -1.87
TSPAN6O43657 AC104332.2-201ENST00000429959 156 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms